microsoft / microsoft/vscode-python-environments

How to expose environments created with Snakemake

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描述

In [Snakemake](https://snakemake.readthedocs.io/en/stable/snakefiles/rules.html#target-rules) you normally do something like this

```python
rule my_rule:
input:
"some/input"
output:
"some/output"
conda:
"a/conda/env.yml"
script:
"some/script.py"
```

when the workflow is launched a new conda env will be created under `.snakemake/conda/xxx` where `xxx` is a hash created by snakemake (kind of a name)

Now I was hoping that doing this in `.vscode/settings.json` was enough,

```json
{
....
"python-envs.workspaceSearchPaths": [".snakemake/conda/**"],
....
}
```

But then when I e.g. open a jupyter notebook from VSCode I do not see any of those envs (neither as simple envs nor as kernels as all of them have also `ipykernel` installed)

Am I missing something?

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调研方向

从 .vscode/settings.json 配置开始,将 python-envs.workspaceSearchPaths 设置为 .snakemake/conda/**,重现环境发现过程。打开 Jupyter notebook 时,检查生成的 Snakemake 环境是如何处理的,以及它们是否作为环境或 kernel 提供。匹配的环境显示在相关的 VS Code 选择器中即表示完成。

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评估

技术栈
python
领域
tooling
Issue 类型
缺陷
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1-2 天
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活跃
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基本清楚
新手友好度
66/100

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