Owner
BlueBrain
39 indexed repositories · View on GitHub
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nexus
Blue Brain Nexus - A knowledge graph for data-driven science
Scala · 301 stars
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NeuroMorphoVis
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of ne...
Python · 138 stars
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nexus-forge
Building and Using Knowledge Graphs made easy
Python · 52 stars
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Tide
Tiled Interactive Display Environment
C++ · 50 stars
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VessMorphoVis
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels...
Python · 50 stars
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MOOC-neurons-and-synapses-2017
Reference data for the "Simulation Neuroscience:Neurons and Synapses" Massive Online Open Course
Jupyter Notebook · 44 stars
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Ultraliser
Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i...
C++ · 36 stars
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BlueGraph
Python framework for graph analytics and co-occurrence analysis
Python · 34 stars
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Deflect
C++ library for building applications to stream pixels to Tide
C++ · 25 stars
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Brion
Blue Brain C++ File IO Library
C++ · 23 stars
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Atlas-Download-Tools
Search, download, and prepare brain atlas data.
Python · 17 stars
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EModelRunner
Runs cells from stand-alone packages.
Python · 16 stars
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BluePyMM
Blue Brain Python Cell Model Management
Python · 13 stars
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atlas-alignment
Blue Brain multi-modal registration and alignment toolbox
Python · 12 stars
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morphoclass
Neuronal morphology preparation and classification using Machine Learning.
Python · 12 stars
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Jupyter Notebook · 11 stars
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Long-range-micro-connectome
BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome
Python · 10 stars
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Python · 10 stars
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nexus-bbp-domains
BBP domains specification (schemas, vocabularies)
Scala · 9 stars
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Python · 9 stars
- 19 more repositories live on View on GitHub
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enhancement
BlueBrain/hwloc#1 · 2 comments · 0 reactions · 0 assignees ·
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bug
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BlueBrain/neuron-docker-spack#3 · 4 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-hippocampus-network-simulation-2019#48 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-the-multiscale-brain#3 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/Search-Graph-Examples#2 · 4 comments · 0 reactions · 0 assignees ·
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BlueBrain/Tide#294 · 4 comments · 0 reactions · 0 assignees ·
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BlueBrain/Tide#320 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#40 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#41 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#46 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#52 · 9 comments · 0 reactions · 0 assignees ·
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NO Q1 key Open
BlueBrain/MOOC-neurons-and-synapses-2017#53 · 3 comments · 0 reactions · 0 assignees ·
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week 3 assignment Open
BlueBrain/MOOC-neurons-and-synapses-2017#56 · 2 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#79 · 3 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#80 · 2 comments · 0 reactions · 0 assignees ·
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os.unsetenv Open
BlueBrain/MOOC-neurons-and-synapses-2017#81 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#89 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#93 · 2 comments · 0 reactions · 1 assignee ·
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BlueBrain/MOOC-neurons-and-synapses-2017#99 · 0 comments · 0 reactions · 0 assignees ·
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neuro Open
BlueBrain/MOOC-neurons-and-synapses-2017#103 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#104 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#105 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/MOOC-neurons-and-synapses-2017#106 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/nexus-prov#16 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/nexus-prov#23 · 0 comments · 0 reactions · 1 assignee ·
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question
BlueBrain/basalt#10 · 1 comment · 0 reactions · 0 assignees ·
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bug
BlueBrain/basalt#19 · 1 comment · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/basalt#22 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/basalt#49 · 2 comments · 0 reactions · 1 assignee ·
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BlueBrain/basalt#55 · 0 comments · 0 reactions · 0 assignees ·
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enhancement good first issue
BlueBrain/basalt#70 · 1 comment · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/basalt#72 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/basalt#76 · 4 comments · 0 reactions · 0 assignees ·
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Use BBP Sphinx theme Openblocked good first issue
BlueBrain/basalt#77 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/basalt#84 · 0 comments · 0 reactions · 0 assignees ·
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Use C++17 Open
BlueBrain/basalt#85 · 1 comment · 0 reactions · 0 assignees ·
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good first issue
BlueBrain/basalt#93 · 1 comment · 0 reactions · 0 assignees ·
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bug
BlueBrain/basalt#103 · 2 comments · 0 reactions · 1 assignee ·
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BlueBrain/basalt#104 · 0 comments · 0 reactions · 0 assignees ·
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good first issue
BlueBrain/basalt#105 · 1 comment · 0 reactions · 1 assignee ·
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BlueBrain/basalt#109 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/basalt#115 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/Long-range-micro-connectome#1 · 0 comments · 1 reaction · 0 assignees ·
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next prov
BlueBrain/nexus-bbp-domains#9 · 0 comments · 1 reaction · 0 assignees ·
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next prov
BlueBrain/nexus-bbp-domains#10 · 5 comments · 1 reaction · 0 assignees ·
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BlueBrain/nexus-bbp-domains#11 · 0 comments · 0 reactions · 0 assignees ·
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prov
BlueBrain/nexus-bbp-domains#56 · 0 comments · 0 reactions · 0 assignees ·
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coreschemas next
BlueBrain/nexus-bbp-domains#59 · 0 comments · 0 reactions · 1 assignee ·
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enhancement morphology review
BlueBrain/nexus-bbp-domains#60 · 6 comments · 0 reactions · 3 assignees ·