Owner
BlueBrain
39 indexed repositories · View on GitHub
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nexus
Blue Brain Nexus - A knowledge graph for data-driven science
Scala · 301 stars
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NeuroMorphoVis
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of ne...
Python · 138 stars
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nexus-forge
Building and Using Knowledge Graphs made easy
Python · 52 stars
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Tide
Tiled Interactive Display Environment
C++ · 50 stars
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VessMorphoVis
A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing vasculature (or blood vessels...
Python · 50 stars
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MOOC-neurons-and-synapses-2017
Reference data for the "Simulation Neuroscience:Neurons and Synapses" Massive Online Open Course
Jupyter Notebook · 44 stars
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Ultraliser
Reconstruction of watertight meshes, annotated volumes and center line skeletons of neuroscience spatial structures from non-watertight i...
C++ · 36 stars
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BlueGraph
Python framework for graph analytics and co-occurrence analysis
Python · 34 stars
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Deflect
C++ library for building applications to stream pixels to Tide
C++ · 25 stars
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Brion
Blue Brain C++ File IO Library
C++ · 23 stars
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Atlas-Download-Tools
Search, download, and prepare brain atlas data.
Python · 17 stars
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EModelRunner
Runs cells from stand-alone packages.
Python · 16 stars
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BluePyMM
Blue Brain Python Cell Model Management
Python · 13 stars
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atlas-alignment
Blue Brain multi-modal registration and alignment toolbox
Python · 12 stars
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morphoclass
Neuronal morphology preparation and classification using Machine Learning.
Python · 12 stars
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Jupyter Notebook · 11 stars
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Long-range-micro-connectome
BlueBrain's recipe writer to parameterize structure and logic of a mouse whole-neocortex connectome
Python · 10 stars
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Python · 10 stars
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nexus-bbp-domains
BBP domains specification (schemas, vocabularies)
Scala · 9 stars
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Python · 9 stars
- 19 more repositories live on View on GitHub
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enhancement
BlueBrain/nexus-python-sdk#23 · 0 comments · 1 reaction · 0 assignees ·
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BlueBrain/nexus-python-sdk#26 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/nexus-python-sdk#47 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/nexus-python-sdk#49 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/nexus-python-sdk#50 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/nexus-python-sdk#55 · 0 comments · 1 reaction · 0 assignees ·
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BlueBrain/nexus-python-sdk#75 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/nexus-python-sdk#85 · 1 comment · 0 reactions · 0 assignees ·
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Fetch File metadata Open
BlueBrain/nexus-python-sdk#100 · 0 comments · 0 reactions · 0 assignees ·
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clang-tidy
BlueBrain/hpc-coding-conventions#19 · 0 comments · 0 reactions · 0 assignees ·
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clang-tidy
BlueBrain/hpc-coding-conventions#20 · 0 comments · 0 reactions · 0 assignees ·
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CMake integration
BlueBrain/hpc-coding-conventions#24 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/hpc-coding-conventions#32 · 3 comments · 0 reactions · 2 assignees ·
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BlueBrain/hpc-coding-conventions#33 · 9 comments · 0 reactions · 0 assignees ·
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BlueBrain/hpc-coding-conventions#78 · 1 comment · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/hpc-coding-conventions#80 · 1 comment · 0 reactions · 0 assignees ·
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Clang-tidy upgrade Open
BlueBrain/hpc-coding-conventions#84 · 1 comment · 0 reactions · 0 assignees ·
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CMake integration
BlueBrain/hpc-coding-conventions#97 · 7 comments · 2 reactions · 0 assignees ·
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CMake integration
BlueBrain/hpc-coding-conventions#100 · 6 comments · 0 reactions · 0 assignees ·
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bug clang-format
BlueBrain/hpc-coding-conventions#156 · 0 comments · 0 reactions · 1 assignee ·
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BlueBrain/plotly-helper#2 · 0 comments · 0 reactions · 0 assignees ·
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add plane? Open
BlueBrain/plotly-helper#3 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/plotly-helper#5 · 0 comments · 0 reactions · 1 assignee ·
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CLI Wishlist Open
BlueBrain/bluepyentity#1 · 14 comments · 0 reactions · 0 assignees ·
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API / Code Open
BlueBrain/bluepyentity#2 · 3 comments · 2 reactions · 0 assignees ·
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BlueBrain/bluepyentity#20 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#11 · 0 comments · 0 reactions · 0 assignees ·
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✅ Open Source QA
BlueBrain/morphoclass#12 · 2 comments · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#22 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#23 · 0 comments · 0 reactions · 0 assignees ·
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📜 Paper 🔥 New Feature
BlueBrain/morphoclass#26 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#30 · 0 comments · 0 reactions · 0 assignees ·
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Enable bandit Open
BlueBrain/morphoclass#36 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#37 · 1 comment · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#38 · 0 comments · 0 reactions · 0 assignees ·
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📜 Paper
BlueBrain/morphoclass#47 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/morphoclass#48 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#56 · 0 comments · 0 reactions · 0 assignees ·
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bug
BlueBrain/morphoclass#79 · 2 comments · 0 reactions · 1 assignee ·
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BlueBrain/morphoclass#86 · 0 comments · 0 reactions · 0 assignees ·
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BlueBrain/morphoclass#87 · 1 comment · 0 reactions · 0 assignees ·
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Add graph embeddings Openenhancement
BlueBrain/BlueGraph#65 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/BlueGraph#66 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/BlueGraph#67 · 0 comments · 0 reactions · 0 assignees ·
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bug
BlueBrain/BlueGraph#68 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/BlueGraph#69 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/BlueGraph#72 · 0 comments · 0 reactions · 0 assignees ·
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enhancement
BlueBrain/BlueGraph#80 · 0 comments · 2 reactions · 0 assignees ·
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bug
BlueBrain/BlueGraph#89 · 0 comments · 0 reactions · 1 assignee ·
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enhancement
BlueBrain/BlueGraph#90 · 0 comments · 0 reactions · 0 assignees ·