Owner

MetaCell

25 indexed repositories · View on GitHub

nwb-explorer
NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files

JavaScript · 27 stars
NetPyNE-UI
NetPyNE User interface

JavaScript · 23 stars
cloud-harness

Python · 19 stars
NEURON-UI
NEURON User Interface

AMPL · 18 stars
geppetto-netpyne
Geppetto extension for NetPyNE

JavaScript · 6 stars
geppetto-meta

JavaScript · 6 stars
sds-viewer
SDS Viewer

JavaScript · 4 stars
geppetto-scidash
Geppetto scidash extension

JavaScript · 3 stars
geppetto-NeuroSCAN
Yale NeuroSCAN & Promoter DB Project

JavaScript · 3 stars
interlex

JavaScript · 3 stars
jupyter-neuron-docker
Docker file for Jupyter Notebook and NEURON

Dockerfile · 2 stars
scidash-api
SciDash Python API to interact with the SciDash backend from any Python environment

Jupyter Notebook · 2 stars
scidash
SciDash entry point

Python · 2 stars
salk-interactive-atlas

TypeScript · 2 stars
HNN-UI
HNN User Interface

Python · 2 stars
virtual-fly-brain

JavaScript · 2 stars
social-lab
Social Lab

CSS · 1 star
geppetto-hnn
Geppetto extension for HNN

JavaScript · 1 star
geppetto-nwbexplorer

HTML · 1 star
java-virgo-maven
Repo that hosts a dockerfile with Java, Eclipse Virgo and Maven preinstalled

Shell · 1 star
5 more repositories live on View on GitHub

Beginner friendly Everything

Open All

No organizations are available in the search field Open

Difficulty 3/5 1-2 days Newbie friendliness 65/100

MetaCell/interlex#193 · 1 comment · Opened Sep 17, 2026
Ontologies are difficult to access Open

Difficulty 3/5 1-2 days Newbie friendliness 55/100

MetaCell/interlex#192 · Opened Sep 17, 2026
Cannot add cells to a new ontology Open

Difficulty 3/5 1-2 days Newbie friendliness 68/100

MetaCell/interlex#191 · Opened Sep 17, 2026
Selecting an ontology file generates "cell card overview not yet implemented" error Open

Difficulty 3/5 1-2 days Newbie friendliness 62/100

MetaCell/interlex#190 · Opened Sep 17, 2026
Cross-nomenclature mapping is incorrectly labeled. Open

MetaCell/interlex#189 · 1 assignee · Opened Sep 3, 2026
Cell Card relationship graph is incorrect Open

MetaCell/interlex#188 · 1 comment · 1 assignee · Opened Sep 3, 2026
DOI representation in cell cards needs to be more understandable and consistent Open

Difficulty 3/5 1-2 days Newbie friendliness 55/100

MetaCell/interlex#187 · 5 comments · Opened Sep 3, 2026
Selecting a biological property term doesn't maintain context ontology Open

MetaCell/interlex#186 · 1 comment · 1 assignee · Opened Sep 3, 2026
Is Heirachy and relations graph constructed correctly? Open

MetaCell/interlex#185 · 1 assignee · Opened Sep 2, 2026
Open in a new tab icons are different across tabs Open

MetaCell/interlex#184 · 1 comment · 1 assignee · Opened Sep 2, 2026
PRECISION cell terms are not being displayed as ilxtr:localLabel Open

Difficulty 2/5 1-3 hours Newbie friendliness 65/100

MetaCell/interlex#183 · Opened Sep 2, 2026
add to active ontology should use the term iri for the page not the backend hostname Open

Difficulty 2/5 1-3 hours Newbie friendliness 68/100

MetaCell/interlex#178 · Opened Jul 9, 2026
Search bar inconsistencies are confusing Open

Difficulty 4/5 3-5 days Newbie friendliness 45/100

MetaCell/interlex#175 · 1 comment · Opened Jun 30, 2026
Dashboard should list all ontologies created by me Open

MetaCell/interlex#171 · 1 assignee · Opened Jun 26, 2026
Improve navigation within term page with anchor links or similar Open

MetaCell/interlex#165 · 1 comment · 1 assignee · Opened Jun 25, 2026
Registering for an account needs explanation Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

MetaCell/interlex#162 · 1 comment · Opened Jun 25, 2026
on Single term page, properties should display skos:prefLabel for their labels Open

Difficulty 3/5 1-2 days Newbie friendliness 62/100

MetaCell/interlex#160 · 3 comments · Opened Jun 22, 2026
if logged in, copy URI link includes my namespace resulting in 404 Open

Difficulty 4/5 3-5 days Newbie friendliness 48/100

MetaCell/interlex#148 · 6 comments · Opened Jun 18, 2026
page design is not responsive to different monitor sizes Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

MetaCell/interlex#147 · 1 comment · Opened Jun 18, 2026
it should be possible to edit the term overview directly Open

MetaCell/interlex#140 · 1 assignee · Opened Jun 10, 2026
add ontology needs to add a required field which is the iri of the new ontology Open

Difficulty 2/5 1-3 hours Newbie friendliness 72/100

MetaCell/interlex#137 · 5 comments · Opened May 7, 2026
[Proposal] Add warning message when setParam fails silently Open

Difficulty 2/5 1-3 hours Newbie friendliness 45/100

MetaCell/NetPyNE-UI#835 · Opened Jan 30, 2026
data corruption? Open

bug

MetaCell/sckan-composer#530 · 2 assignees · Opened Nov 3, 2025
We should not have populations with the same population set and number (rdfs label) Open

enhancement

MetaCell/sckan-composer#524 · 5 comments · 3 assignees · Opened Oct 22, 2025
Allow multiple predicates per single Relationship Open

Priority required

MetaCell/sckan-composer#505 · 1 assignee · Opened Sep 12, 2025
Folder colors to be gray Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MetaCell/sds-viewer#277 · Opened Sep 4, 2025
Animal Subject has Weight Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MetaCell/sds-viewer#276 · Opened Sep 4, 2025
Stale browser state allows bypass of Exported state edit prohibition Open

bug Priority Low

MetaCell/sckan-composer#504 · 1 assignee · Opened Aug 29, 2025
Add button to add note in Admin Interface to the top of the panel Open

enhancement Priority Low

MetaCell/sckan-composer#503 · 5 comments · 1 assignee · Opened Aug 29, 2025
Feature: add dendrite to population display Open

Design required Priority required

MetaCell/sckan-composer#499 · 1 comment · 1 assignee · Opened Aug 14, 2025
permit statement search to include short name Open

Priority required

MetaCell/sckan-composer#496 · 2 comments · 1 assignee · Opened Aug 4, 2025
deadlock on big populations Open

bug

Difficulty 5/5 Over a week Newbie friendliness 15/100

MetaCell/sckan-composer#495 · Opened Aug 3, 2025
Forward connections chips width is too forgiven Open

bug

MetaCell/sckan-composer#494 · 7 comments · 2 assignees · Opened Jul 31, 2025
Update Behavior when clicking on Groups chips on Metadata panel Open

Difficulty 3/5 1-2 days Newbie friendliness 42/100

MetaCell/sds-viewer#264 · Opened Jul 15, 2025
Show full names of nodes on graph viewer Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

MetaCell/sds-viewer#263 · Opened Jul 15, 2025
Make Sidebar Expandable Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MetaCell/sds-viewer#262 · Opened Jul 15, 2025
Generate a set of pre-configured scripts Open

new feature

Difficulty 5/5 Over a week Newbie friendliness 28/100

MetaCell/cloud-harness#810 · 1 comment · Opened Jun 11, 2025
Add back Upload Datasets From Local Disk Feature Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

MetaCell/sds-viewer#247 · Opened May 27, 2025
Add sparc:SamplePopulation sparc:SubjectPopulation Open

enhancement

MetaCell/sds-viewer#246 · 1 assignee · Opened May 27, 2025
When using a custom image for on_exit_notify of a workflow queue and payload should not be mandatory Open

good first issue

Difficulty 2/5 1-3 hours Newbie friendliness 45/100

MetaCell/cloud-harness#801 · Opened May 20, 2025
Display all Properties for sparc:sites, sparc:performances, sparc:subjects and sparc:samples Open

enhancement

MetaCell/sds-viewer#245 · 1 assignee · Opened May 20, 2025
Parse sparc:site Open

enhancement

MetaCell/sds-viewer#244 · 1 assignee · Opened May 20, 2025
Parse sparc:performance Open

enhancement

MetaCell/sds-viewer#243 · 1 assignee · Opened May 20, 2025
Add feedback form Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MetaCell/sds-viewer#241 · Opened Apr 29, 2025
Export produces bad csv formatting Open

bug

MetaCell/sckan-composer#465 · 5 comments · 1 assignee · Opened Apr 11, 2025
Statement Preview is not updated when a phentoype is deleted from the interface Open

bug Priority Low

MetaCell/sckan-composer#464 · 1 comment · 1 assignee · Opened Apr 9, 2025
Improve Process for new users (and adding users) Open

Priority Low

MetaCell/sckan-composer#453 · 2 comments · 1 assignee · Opened Mar 26, 2025
Docker Build Error: Failed to Pull jupyter/base-notebook:hub-1.5.0 Due to Authorization Issue Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MetaCell/NetPyNE-UI#832 · Opened Jan 30, 2025
Create a entry in the system note history to indicate what information was exported to SCKAN Open

Priority Low

MetaCell/sckan-composer#413 · 5 comments · 1 assignee · Opened Jan 23, 2025
Server error 500 when attempting to delete knowledge statement in admin interface Open

bug

MetaCell/sckan-composer#402 · 1 comment · 1 assignee · Opened Dec 20, 2024

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