nf-core/methylarray
View on GitHubProcess methylation data from Illumina arrays. Pre-processing, quality checks, confounder check and DMPs (differentially methylated positions) and DMRs (differentially methylated regions). Optionally estimates cell type composition and adjusts data for it.
- Stars
- 9
- Forks
- 6
- Open beginner issues
- 0
- Indexed issues
- 9
- Dominant language
- Nextflow
- License
- MIT
- Last GitHub push
- Jul 27, 2026
- Latest indexed
- Sep 19, 2026
- Contributing guide
- Contributing guide
- Code of conduct
- Code of conduct
- Beginner labels
- No beginner labels indexed
- PR merge metrics
- No merged PRs in 30d
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enhancement
Difficulty 5/5 Over a week Newbie friendliness 25/100
nf-core/methylarray#40 ·
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enhancement
Difficulty 4/5 3-5 days Newbie friendliness 35/100
nf-core/methylarray#22 ·
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enhancement
Difficulty 5/5 Over a week Newbie friendliness 20/100
nf-core/methylarray#21 ·
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enhancement
Difficulty 5/5 Over a week Newbie friendliness 25/100
nf-core/methylarray#20 ·
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enhancement
Difficulty 5/5 Over a week Newbie friendliness 25/100
nf-core/methylarray#19 ·
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enhancement
Difficulty 5/5 Over a week Newbie friendliness 25/100
nf-core/methylarray#18 ·
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enhancement
Difficulty 5/5 Over a week Newbie friendliness 25/100
nf-core/methylarray#17 ·
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enhancement
Difficulty 2/5 1-3 hours Newbie friendliness 45/100
nf-core/methylarray#16 ·
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enhancement
Difficulty 3/5 1-2 days Newbie friendliness 45/100
nf-core/methylarray#14 ·