nf-core / nf-core/methylarray

Add package versions to conda environment.yaml files

Open
#16 0 comments 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

enhancement
Dominant language
Nextflow
Stars
9
Forks
6
PR merge metrics
No merged PRs in 30d

Description

Description of feature

Some conda package versions are in a conflict, thus, one has to update recipes or append versions to current environment files, which have been tested and work.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Locate the conda environment.yaml files in the repository and review the package entries and their existing version constraints. Update the relevant package versions based on the tested working environments, then validate that the environment files can be created without dependency conflicts.

Written by the indexing model from the issue text.

Assessment

Tech stack
yaml
Domain
tooling
Issue type
Feature
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
45/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.