ioos/bio_data_guide

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Standardizing Marine Biological Data Working Group - An open community to facilitate the mobilization of biological data to OBIS.

Stars: 55
Forks: 24
Open beginner issues: 0
Indexed issues: 135

Dominant language: Jupyter Notebook
License: MIT
Last GitHub push: Aug 18, 2026
Latest indexed: Sep 20, 2026
Contributing guide: Contributing guide
Code of conduct: Code of conduct
Beginner labels: No beginner labels indexed
PR merge metrics: No merged PRs in 30d

Beginner friendly Everything

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135 open issues indexed

Macroinvertebrate Biodiversity in Depositional Biotopes of the Warri River, Nigeria Open

data help Stale workshop

ioos/bio_data_guide#334 · 1 comment · 2 assignees · Opened Oct 1, 2025
[dataset]: Vanessa.Diatoms.ELP Open

data help workshop

ioos/bio_data_guide#333 · 1 comment · 2 assignees · Opened Sep 30, 2025
Diatoms associated with seagrass meadows in the Patos Lagoon Estuary, RS, Brazil Open

data help Stale workshop

ioos/bio_data_guide#331 · 1 comment · 2 assignees · Opened Sep 30, 2025
[dataset]: Data_cetacean Open

data help Stale workshop

ioos/bio_data_guide#330 · 3 comments · 2 assignees · Opened Sep 30, 2025
[dataset]: Deep-sea megafauna density Open

data help Stale workshop

ioos/bio_data_guide#329 · 1 comment · 2 assignees · Opened Sep 30, 2025
[dataset]: Seagrass Dipnet Data Open

data help workshop

ioos/bio_data_guide#328 · 4 comments · 2 assignees · Opened Sep 29, 2025
[dataset]: Epifauna_Zostera_marina Open

data help Stale workshop

ioos/bio_data_guide#327 · 1 comment · 2 assignees · Opened Sep 29, 2025
[dataset]: marine invertebrates from the RMCA Open

data help Stale workshop

ioos/bio_data_guide#326 · 1 comment · 2 assignees · Opened Sep 29, 2025
[dataset]: Kenya EEZ dermersal fishery from trawl survey Open

data help Stale workshop

ioos/bio_data_guide#325 · 1 comment · 2 assignees · Opened Sep 28, 2025
[dataset]: startingdataset Open

data help Stale workshop

ioos/bio_data_guide#324 · 1 comment · 2 assignees · Opened Sep 27, 2025
[dataset]: PMN Open

data help Stale workshop

ioos/bio_data_guide#323 · 5 comments · 2 reactions · 2 assignees · Opened Sep 25, 2025
[dataset]: Small-scale patches of detritus as habitat for invertebrates within a Zostera noltei meadow Open

data help workshop

ioos/bio_data_guide#322 · 3 comments · 2 assignees · Opened Sep 24, 2025
[dataset]: Maumee River eDNA 2024 Transects Open

data help Stale workshop

ioos/bio_data_guide#321 · 1 comment · 1 reaction · 2 assignees · Opened Sep 18, 2025
[dataset]: SFS x 2025 Biological Data Mobilization Workshop Open

data help Stale workshop

ioos/bio_data_guide#319 · 1 comment · 2 assignees · Opened Sep 16, 2025
[dataset]: Trinidad Marine Plankton 2025 Data Open

data help workshop

ioos/bio_data_guide#318 · 2 assignees · Opened Sep 15, 2025
[dataset]: US Gulf Coast Shallow Reef Bioacoustics Open

data help workshop

ioos/bio_data_guide#317 · 2 assignees · Opened Sep 15, 2025
Kawésqar National Reserve Benthic Fauna 2024 Expedition Open

data help workshop

ioos/bio_data_guide#316 · 2 assignees · Opened Sep 15, 2025
[dataset]: Distribution and Diversity of Invertebrates within the Intertidal zone of South-Eastern Eleuthera Open

data help workshop

ioos/bio_data_guide#315 · 2 assignees · Opened Sep 15, 2025
[dataset]: Longline Fish Research Open

data help workshop

ioos/bio_data_guide#314 · 2 assignees · Opened Sep 15, 2025
[dataset]: Benthic macroinfaunal taxa, Arctic Marine Biodiversity Observing Network (AMBON) Chukchi Sea research cruise, collected from Norseman II in Bering Sea and Chukchi Sea from 2017 Open

data help workshop

ioos/bio_data_guide#313 · 2 assignees · Opened Sep 14, 2025
Abundance, Distribution and Diversity of Macrobenthos in Chittagong Coast, Bangladesh Open

data help workshop

ioos/bio_data_guide#311 · 2 assignees · Opened Sep 14, 2025
[dataset]: Reef benthic cover and composition Open

data help workshop

ioos/bio_data_guide#310 · 2 assignees · Opened Sep 12, 2025
[dataset]: Coral reef coverage Open

data help workshop

ioos/bio_data_guide#309 · 2 assignees · Opened Sep 11, 2025
[dataset]: Fishes and Seaweed Imagery 2025 Open

data help workshop

ioos/bio_data_guide#308 · 2 assignees · Opened Sep 9, 2025
[dataset]: NOAA Ocean Exploration ROV Video Annotations for Okeanos Explorer Expedition EX2301 Open

data help workshop

ioos/bio_data_guide#307 · 2 comments · 1 reaction · 2 assignees · Opened Sep 8, 2025
[dataset]: Summerged Aquatic Vegetation Open

data help workshop

ioos/bio_data_guide#306 · 5 comments · 2 assignees · Opened Sep 5, 2025
[dataset]: Bivalves from shallow to abyssal depths in the southern Gulf of Mexico Open

data help workshop

ioos/bio_data_guide#303 · 4 comments · 1 reaction · 2 assignees · Opened Aug 28, 2025
TCI Spiny Lobster Assessment for the past decade Open

data help workshop

ioos/bio_data_guide#302 · 2 comments · 2 assignees · Opened Aug 28, 2025
[dataset]: IFCB MBARI Powerbuoy Open

data help workshop

ioos/bio_data_guide#301 · 1 comment · 1 reaction · 2 assignees · Opened Aug 27, 2025
[dataset]: Barbados lionfish sightings 2012 Open

data help workshop

ioos/bio_data_guide#300 · 1 comment · 2 assignees · Opened Aug 27, 2025
[dataset]: Bodega Bay 2018 Benthic eDNA Open

data help workshop

ioos/bio_data_guide#299 · 7 comments · 1 reaction · 2 assignees · Opened Aug 24, 2025
[dataset]: DDT Dumpsite San Pedro Basin Open

data help workshop

ioos/bio_data_guide#298 · 2 comments · 2 assignees · Opened Aug 22, 2025
[dataset]: Lagos Lagoon 2024 - Nutrient and physico-chemical parameters Open

data help workshop

ioos/bio_data_guide#297 · 2 comments · 2 assignees · Opened Aug 20, 2025
[dataset]: Caravela RJ Open

data help workshop

ioos/bio_data_guide#296 · 2 assignees · Opened Aug 20, 2025
[dataset]: Caribbean Coral Open

data help workshop

ioos/bio_data_guide#295 · 1 comment · 2 assignees · Opened Aug 20, 2025
[dataset]: NORGRASS: Seagrass field observations on the north coast of Spain Open

data help workshop

ioos/bio_data_guide#294 · 3 comments · 1 reaction · 2 assignees · Opened Aug 20, 2025
[dataset]: Tayrona coral data 2023-2024 Open

data help workshop

ioos/bio_data_guide#293 · 2 comments · 1 reaction · 2 assignees · Opened Aug 19, 2025
[dataset]: Rio de janeiro Ascidian and other invertebrates Open

data help workshop

ioos/bio_data_guide#292 · 1 comment · 2 assignees · Opened Aug 19, 2025
[dataset]: Reef Fish Survey (MARMAP) Data Open

data help workshop

ioos/bio_data_guide#291 · 2 comments · 2 assignees · Opened Aug 15, 2025
[dataset] Review CAGES data and publish all data to OBIS Open

data help

ioos/bio_data_guide#279 · 1 comment · 1 reaction · 1 assignee · Opened Sep 23, 2024
[dataset] align IFCB data to DwC and produce notebook to demonstrate process Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

ioos/bio_data_guide#277 · 3 comments · 1 reaction · Opened Sep 23, 2024
Data management advices before scientists leave for fieldwork Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

ioos/bio_data_guide#268 · Opened Jun 3, 2024
[dataset]: Pedro Cays Zooplankton species list training Open

data help

ioos/bio_data_guide#267 · 2 assignees · Opened Apr 23, 2024
UVic Zooarchaeology dataset Open

data help workshop

ioos/bio_data_guide#264 · 11 comments · 2 assignees · Opened Apr 22, 2024
Add presentations for DwC related presentations and serve as webpage Open

Difficulty 5/5 Over a week Newbie friendliness 30/100

ioos/bio_data_guide#263 · Opened Apr 18, 2024
Best practices and informed opinions on Event and Occurrence ID's in aligned, Darwin Core data Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

ioos/bio_data_guide#261 · 6 comments · 1 reaction · Opened Mar 29, 2024
[dataset]: Puget Sound Zooplankton Monitoring Program dataset Open

data help published Stale workshop

ioos/bio_data_guide#260 · 25 comments · 2 reactions · 1 assignee · Opened Mar 21, 2024
[dataset]: Passive Acoustic Reporting System Templates from PACM Open

data help workshop

ioos/bio_data_guide#259 · 6 comments · 1 assignee · Opened Mar 14, 2024
Alaska Bottom Trawl Survey Data: https://afsc-gap-products.github.io/gap_products/ Open

data help workshop

ioos/bio_data_guide#250 · 9 comments · 1 reaction · 2 assignees · Opened Feb 15, 2024
[dataset]: Uploading invertebrate stable isotope data to OBIS Open

data help workshop

ioos/bio_data_guide#248 · 3 comments · 1 reaction · 2 assignees · Opened Feb 14, 2024

ioos/bio_data_guide

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