[dataset]: Maumee River eDNA 2024 Transects
@timvdstap is already working on this.
Since Sep 18, 2025.
- Dominant language
- Jupyter Notebook
- Stars
- 55
- Forks
- 24
- PR merge metrics
- No merged PRs in 30d
Description
Contact details
algayer@umich.edu
Dataset Title
Transects data 2024
Describe your dataset and any specific challenges or blockers you have or anticipate.
HTqPCR results from eDNA field samples collected from the Maumee River. Spatial and temporal sampling was conducted, giving us a picture of how cyanbacterial toxins vary across time and space from May - October 2024. We used a targeted approach that included 9 cyanobacterial toxins, 4 fish species, 3 plant species, and 2 aquatic invertebrates, all considered biological threats in the Great Lakes and their waterways. I'm unsure if this data is suitable for the OBIS database, as it is derived from DNA observations and primarily reports occurrences of cyanobacterial toxin presence.
Info about "raw" Data Files.
Raw data is output from HTqPCR runs - we also have metadata with environmental conditions from each site.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Assessment
This issue has not been assessed yet.