Owner

WormBase

2 indexed repositories · View on GitHub

ACKnowledge
Author Curation to Knowledgebases

JavaScript · 3 stars
caltech-curation-services
Modular curation services for Caltech WormBase data

Perl · 1 star

Beginner friendly Everything

Open All

Update the README file to specifically ask about contributing or collaborating Open

Difficulty 1/5 Under an hour Newbie friendliness 95/100

WormBase/ACKnowledge#423 · Opened May 4, 2026
generate pdf certificates for authors on the curator portal with number of completed submissions Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

WormBase/ACKnowledge#411 · Opened Mar 23, 2026
Improve stats pages Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

WormBase/ACKnowledge#410 · Opened Mar 23, 2026
Update the help text for alleles and phenotypes Open

Difficulty 1/5 Under an hour Newbie friendliness 55/100

WormBase/ACKnowledge#406 · Opened Feb 26, 2026
ACKnowledge transition to the Alliance Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

WormBase/ACKnowledge#397 · Opened Jan 26, 2026
Add the latest Alliance paper as a reference in the About section of the submission form Open

Difficulty 1/5 Under an hour Newbie friendliness 55/100

WormBase/ACKnowledge#396 · Opened Jan 26, 2026
Update the help email address to an Alliance domain Open

Difficulty 2/5 1-3 hours Newbie friendliness 38/100

WormBase/ACKnowledge#395 · Opened Jan 26, 2026
Review FAQs for January 2026 release Open

FAQs

WormBase/ACKnowledge#393 · 2 assignees · Opened Dec 16, 2025
notify curators (admins) when a submission contains data from google spreadsheets Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

WormBase/ACKnowledge#391 · Opened Dec 15, 2025
Check email extraction for WBPaper00068409 Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

WormBase/ACKnowledge#388 · Opened Oct 30, 2025
Species parentage validation Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

WormBase/ACKnowledge#387 · Opened Oct 28, 2025
Create redirects for canopus urls Open

WormBase/caltech-curation-services#84 · 12 comments · 1 assignee · Opened Oct 16, 2025
Save data if you change user Open

Difficulty 3/5 1-2 days Newbie friendliness 38/100

WormBase/ACKnowledge#386 · 1 comment · Opened Oct 6, 2025
Investigate whether we can fix the WBPersonundefined author for WBPaper00067461 Open

author attribution

Difficulty 4/5 3-5 days Newbie friendliness 30/100

WormBase/ACKnowledge#380 · Opened Sep 9, 2025
Parse Supplementary Table 1 from WBPaper00068221 for genes studied? Open

Difficulty 5/5 Over a week Newbie friendliness 30/100

WormBase/ACKnowledge#378 · Opened Aug 28, 2025
Consider withholding papers from authors that only have species 'C. elegans' and no other entities extracted Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

WormBase/ACKnowledge#374 · 1 comment · Opened Aug 19, 2025
create a script to upload genes from excel spreadsheets in afp_genestudied and pap_gene Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

WormBase/ACKnowledge#373 · 1 comment · Opened Aug 18, 2025
Identify strategies to enforce ORCID usage Open

WormBase/ACKnowledge#369 · 3 assignees · Opened Jul 31, 2025
WormBase forms dependencies Open

alliance migration - curation forms

Difficulty 4/5 3-5 days Newbie friendliness 25/100

WormBase/ACKnowledge#362 · 1 comment · Opened Jul 31, 2025
Revise every mention of WormBase in the form Open

WormBase/ACKnowledge#359 · 1 assignee · Opened Jul 31, 2025
Compare TP and ABC NN for other datatypes Open

Alliance migration

WormBase/ACKnowledge#345 · 3 comments · 2 assignees · Opened Jun 30, 2025
Set up a report on the 25th of the month with the list of partial submissions Open

WormBase/ACKnowledge#334 · 1 comment · 1 assignee · Opened Feb 24, 2025
Implement APICURON badging Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

WormBase/ACKnowledge#329 · 1 comment · Opened Jan 30, 2025
Update functions to get list of papers without entities to consider sgd genes Open

SGD

Difficulty 4/5 3-5 days Newbie friendliness 25/100

WormBase/ACKnowledge#328 · Opened Jan 15, 2025
Add SGD gene name extraction to overall ACKnowledge pipeline Open

SGD

Difficulty 4/5 3-5 days Newbie friendliness 25/100

WormBase/ACKnowledge#327 · Opened Jan 13, 2025
Set up UI component to edit gene list for SGD Open

SGD

Difficulty 4/5 3-5 days Newbie friendliness 38/100

WormBase/ACKnowledge#325 · Opened Jan 13, 2025
Create UI to show genes extracted for multiple MODs Open

SGD

Difficulty 3/5 1-2 days Newbie friendliness 45/100

WormBase/ACKnowledge#324 · Opened Jan 13, 2025
Check email extraction from WBPaper00067261 Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 35/100

WormBase/ACKnowledge#316 · 1 comment · Opened Oct 25, 2024
Where do entities go Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

WormBase/ACKnowledge#314 · Opened Oct 21, 2024
Reviewing sentences for Michael for RNAi, and physical and genetic interaction Open

Difficulty 3/5 1-2 days Newbie friendliness 30/100

WormBase/ACKnowledge#313 · Opened Oct 21, 2024
Fact extraction project Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

WormBase/ACKnowledge#311 · Opened Oct 21, 2024
Test issue for test milestone Open

WormBase/ACKnowledge#310 · 1 assignee · Opened Oct 21, 2024
Evaluate a zebrafish paper for expression sentence level extraction Open

WormBase/ACKnowledge#300 · 1 assignee · Opened May 23, 2024
Link papers in variant first pass results to ABC instead of tazendra Open

WormBase/caltech-curation-services#82 · 1 assignee · Opened Feb 28, 2024
Improve Tutorials Open

WormBase/ACKnowledge#286 · 2 assignees · Opened Nov 30, 2023
Sync data between prod and dev Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

WormBase/caltech-curation-services#67 · Opened Oct 19, 2023
Use local time zone for acedb and citace users Open

WormBase/caltech-curation-services#62 · 1 comment · 1 assignee · Opened Sep 28, 2023
Discuss creating an archive system for curators to put files into for perpetuity Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

WormBase/caltech-curation-services#59 · Opened Sep 7, 2023
Add documentation on how to deploy to README Open

WormBase/caltech-curation-services#57 · 1 assignee · Opened Aug 25, 2023
create acedb mirror for testing from acedb for all curators Open

WormBase/caltech-curation-services#55 · 1 assignee · Opened Aug 17, 2023
Port prometheus alerts from textpressoentral to the new dockerized system Open

WormBase/caltech-curation-services#52 · 1 assignee · Opened Jul 26, 2023
set up ABC bulk uploader for Daniel Open

WormBase/caltech-curation-services#49 · 2 comments · 2 assignees · Opened Jul 19, 2023
Restic backups are broken on wrong key Open

WormBase/caltech-curation-services#48 · 1 comment · 1 assignee · Opened Jul 15, 2023
Set up grafana to monitor gene descriptions pipeline Open

WormBase/caltech-curation-services#46 · 1 comment · 1 assignee · Opened May 26, 2023
Check warnings for dednied access in apache2 logs Open

WormBase/caltech-curation-services#44 · 1 assignee · Opened May 11, 2023
Talk to Kimberly about uploading PDFs by PMID (as well as other curies) Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

WormBase/caltech-curation-services#42 · Opened Apr 21, 2023
Enable citace build on the dockerized system Open

WormBase/caltech-curation-services#41 · 2 comments · 1 assignee · Opened Apr 21, 2023
Enrichment analysis tool header/footer update Open

WormBase/caltech-curation-services#38 · 5 comments · 1 assignee · Opened Apr 15, 2023
WormBase main website github repo uses tazendra Open

Difficulty 5/5 Over a week Newbie friendliness 18/100

WormBase/caltech-curation-services#27 · 3 comments · Opened Mar 2, 2023
Cecilia Person curation needs xml / institution Open

WormBase/caltech-curation-services#24 · 1 assignee · Opened Mar 2, 2023

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