MrGiovanni/ModelsGenesis

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[MICCAI 2019 Young Scientist Award] [MedIA Best Paper Award] Models Genesis: self-supervised pre-training for 3D medical images. Learns transferable representations from unlabeled CT and MRI volumes, then fine-tunes for downstream segmentation and classification. Keras and PyTorch weights included.

Stars: 791
Forks: 141
Open beginner issues: 0
Indexed issues: 28

Dominant language: Jupyter Notebook
License: No license data
Last GitHub push: Aug 25, 2026
Latest indexed: Sep 20, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
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Beginner friendly Everything

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28 open issues indexed

Update competition readme Open

Difficulty 1/5 Under an hour Newbie friendliness 65/100

MrGiovanni/ModelsGenesis#62 · Opened Mar 12, 2024
Are we loading the whole dataset in the memory? Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#61 · Opened Dec 1, 2023
Columns and DataType Not Explicitly Set on line 18 of load_utils.py Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#60 · Opened Nov 21, 2023
About setting threshold values Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#59 · 2 comments · Opened Mar 24, 2023
Question: segmentation_model_evaluation() Open

Difficulty 3/5 1-2 days Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#58 · Opened Jan 30, 2023
segmentation accuracy of lung nodule on LUNA16 Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#57 · 2 comments · Opened Oct 21, 2022
How to use this model for multi-modality dataset? Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#56 · 1 comment · Opened Sep 22, 2022
Not able to fine tune nnUNet with the "competition" style fine-tuning method Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#55 · Opened Jul 17, 2022
Pretrained models for x-ray Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

MrGiovanni/ModelsGenesis#54 · Opened Jun 21, 2022
any detials when training my own pretrain model Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#52 · Opened Mar 11, 2022
query regarding the downstream task Open

Difficulty 3/5 1-2 days Newbie friendliness 15/100

MrGiovanni/ModelsGenesis#51 · Opened Nov 27, 2021
something about cpu explosion Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MrGiovanni/ModelsGenesis#48 · Opened Nov 12, 2021
How to use other medical image dataset Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#47 · Opened Nov 8, 2021
Training from scratch Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

MrGiovanni/ModelsGenesis#46 · Opened Sep 13, 2021
Using the pretrained model on a different dataset Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#45 · Opened Aug 24, 2021
Question about skip-connection in Reconstruction Task Open

Difficulty 5/5 Over a week Newbie friendliness 10/100

MrGiovanni/ModelsGenesis#43 · 2 comments · Opened Aug 14, 2021
some question about this paper Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

MrGiovanni/ModelsGenesis#40 · 1 comment · Opened Jun 7, 2021
Help fine-tuning on other CT data Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

MrGiovanni/ModelsGenesis#39 · 3 comments · Opened Apr 28, 2021
Help with the code Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#38 · 1 comment · Opened Feb 24, 2021
question about pre-processing and network architecture Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#37 · 2 comments · Opened Feb 3, 2021
Reproduction of BraTs results Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#36 · 3 comments · Opened Jan 22, 2021
An error occurred while loading the archive Open

Difficulty 3/5 1-2 days Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#35 · 3 comments · Opened Dec 11, 2020
Have you augmented data? Open

Difficulty 5/5 Over a week Newbie friendliness 10/100

MrGiovanni/ModelsGenesis#34 · 1 comment · Opened Dec 10, 2020
Is the test code available? Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#33 · 2 comments · Opened Nov 19, 2020
Are there detailed results that I could read? Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#31 · 7 comments · Opened Oct 16, 2020
Questions about data pre-processing. Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MrGiovanni/ModelsGenesis#30 · 1 comment · Opened Oct 14, 2020
Questions regarding image in-painting and out-painting Open

Difficulty 2/5 1-3 hours Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#26 · 1 comment · Opened Jul 31, 2020
Pretrain model converge to one value Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MrGiovanni/ModelsGenesis#25 · 2 comments · Opened Jul 20, 2020

MrGiovanni/ModelsGenesis

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