mne-tools/mne-python

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MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

Stars: 3.5k
Forks: 1.6k
Open beginner issues: 0
Indexed issues: 510
Avg merge: 1d 6h
Merged PRs (30d): 100

Dominant language: Python
License: BSD-3-Clause
Last GitHub push: Sep 18, 2026
Latest indexed: Sep 19, 2026
Contributing guide: Contributing guide
Code of conduct: Code of conduct
Beginner labels: No beginner labels indexed

Beginner friendly Everything

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510 open issues indexed

Numerical warnings from `optical_density` / `temporal_derivative_distribution_repair` on channels in `info["bads"]` Open

ENH

Difficulty 3/5 1-2 days Newbie friendliness 68/100

mne-tools/mne-python#14318 · Opened Sep 19, 2026
BUG: interactive plot axes shrink to zero when moving cursor across plot Open

BUG

Difficulty 3/5 1-2 days Newbie friendliness 68/100

mne-tools/mne-python#14317 · Opened Sep 19, 2026
JupyterLite mangles admonitions Open

Difficulty 4/5 3-5 days Newbie friendliness 38/100

mne-tools/mne-python#14311 · 1 comment · 1 reaction · Opened Sep 15, 2026
add phase plot to plot_psd() Open

ENH

Difficulty 5/5 Over a week Newbie friendliness 35/100

mne-tools/mne-python#14309 · 1 comment · Opened Sep 14, 2026
MAINT: line ending test cannot run on Windows (check git blobs instead of the working tree?) Open

Difficulty 3/5 1-2 days Newbie friendliness 68/100

mne-tools/mne-python#14299 · 2 comments · Opened Sep 11, 2026
Support higher-dimensional data in `mne.decoding.Scaler` and `mne.decoding.Vectorizer` Open

ENH

Difficulty 3/5 1-2 days Newbie friendliness 72/100

mne-tools/mne-python#14297 · 1 comment · Opened Sep 11, 2026
Should CTPS threshold='auto' use the trial count rather than the sampling rate? Open

Difficulty 4/5 3-5 days Newbie friendliness 48/100

mne-tools/mne-python#14267 · 5 comments · Opened Sep 2, 2026
Interpolate bridged electrodes silently interpolates using bads Open

Difficulty 4/5 3-5 days Newbie friendliness 48/100

mne-tools/mne-python#14263 · 2 comments · Opened Sep 2, 2026
Update ERP tutorial Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

mne-tools/mne-python#14219 · 1 comment · Opened Aug 25, 2026
Support variable-duration epochs Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

mne-tools/mne-python#14206 · 2 comments · Opened Aug 24, 2026
Investigate whether available Sphinx directives can be dynamically determined Open

Difficulty 4/5 3-5 days Newbie friendliness 45/100

mne-tools/mne-python#14189 · Opened Aug 22, 2026
Possible contribution of a multi-source localization method to MNE-Python Open

ENH

mne-tools/mne-python#14145 · 2 comments · 1 assignee · Opened Aug 9, 2026
Coregistration GUI improvement Open

mne-tools/mne-python#14141 · 2 comments · 1 assignee · Opened Aug 7, 2026
ENH: Deep source modeling Open

ENH

Difficulty 5/5 Over a week Newbie friendliness 35/100

mne-tools/mne-python#14097 · 7 comments · Opened Jul 24, 2026
RawArray._init_kwargs blocks garbage collection by retaining the input NumPy ndarray Open

BUG

mne-tools/mne-python#14074 · 7 comments · 1 reaction · 1 assignee · Opened Jul 18, 2026
mne.viz.Brain modernization Open

ENH

mne-tools/mne-python#14042 · 4 comments · 1 assignee · Opened Jul 10, 2026
Add TPU acceleration for generalized eigenvalue decompositions in decoding module (CSP, SPoC, SSD) Open

ENH

Difficulty 5/5 Over a week Newbie friendliness 35/100

mne-tools/mne-python#13959 · 3 comments · Opened Jun 12, 2026
ENH: Adding KRISS (.kdf) file reader Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

mne-tools/mne-python#13957 · 2 comments · 1 reaction · Opened Jun 9, 2026
Fallback recovery for "EGI epoch first/last samps could not be parsed" (ValueError in read_raw_egi) Open

BUG

Difficulty 4/5 3-5 days Newbie friendliness 48/100

mne-tools/mne-python#13951 · 1 comment · Opened Jun 8, 2026
Inconsistent handling of exclude='bads' in .pick() methods Open

API DOC MEDIUM

mne-tools/mne-python#13946 · 4 comments · 1 assignee · Opened Jun 6, 2026
Switch doc building CI provider? Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

mne-tools/mne-python#13930 · 7 comments · Opened May 28, 2026
GSoC 2026: Scaling Documentation Interactivity via JupyterLite Open

Difficulty 5/5 Over a week Newbie friendliness 10/100

mne-tools/mne-python#13929 · 3 comments · Opened May 27, 2026
GSoC 2026: Event System meta issue Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

mne-tools/mne-python#13927 · Opened May 27, 2026
Update handling of projectors in FIF I/O Open

Difficulty 3/5 1-2 days Newbie friendliness 52/100

mne-tools/mne-python#13910 · 4 comments · Opened May 22, 2026
MNE 1.12.1, pupil data no longer being baseline-corrected Open

BUG

mne-tools/mne-python#13898 · 4 comments · 1 assignee · Opened May 15, 2026
Annotation times cannot be used to get corresponding data Open

BUG

Difficulty 4/5 3-5 days Newbie friendliness 55/100

mne-tools/mne-python#13890 · Opened May 7, 2026
ENH support the array_API for TRF decoder Open

ENH

Difficulty 4/5 3-5 days Newbie friendliness 48/100

mne-tools/mne-python#13876 · 4 comments · 1 reaction · Opened Apr 28, 2026
consider using SG example recommender Open

DOC EASY

Difficulty 4/5 3-5 days Newbie friendliness 35/100

mne-tools/mne-python#13864 · Opened Apr 23, 2026
SourceChGain and SourceChOffset not applied - BCI2k reader Open

Difficulty 3/5 1-2 days Newbie friendliness 58/100

mne-tools/mne-python#13851 · 8 comments · Opened Apr 18, 2026
Adding ArrayLike from numpy as a type hint leads to doc build errors. Open

BUG

Difficulty 3/5 1-2 days Newbie friendliness 55/100

mne-tools/mne-python#13840 · 2 comments · Opened Apr 14, 2026
Add AMICA (Adaptive Mixture ICA) as ICA method Open

ENH

Difficulty 4/5 3-5 days Newbie friendliness 55/100

mne-tools/mne-python#13819 · 28 comments · 2 reactions · Opened Apr 6, 2026
Add noise-weighted Maxwell Filtering (SSS) using Foster's Inverse Open

ENH

Difficulty 5/5 Over a week Newbie friendliness 35/100

mne-tools/mne-python#13808 · 3 comments · 2 reactions · Opened Apr 2, 2026
ENH(`mne.Report`): add `section` parameters to `.add_raw`, `.add_epochs` and `.add_evoked` Open

ENH

Difficulty 3/5 1-2 days Newbie friendliness 65/100

mne-tools/mne-python#13801 · 1 comment · Opened Mar 30, 2026
[ENH] total aoi dwell time - eye tracking data Open

ENH

Difficulty 5/5 Over a week Newbie friendliness 35/100

mne-tools/mne-python#13789 · 1 comment · Opened Mar 25, 2026
ENH: Add `description` filter parameter to `Raw.crop_by_annotations()` Open

ENH

Difficulty 2/5 1-3 hours Newbie friendliness 72/100

mne-tools/mne-python#13743 · 2 comments · Opened Mar 12, 2026
Filtering enforces double precision Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

mne-tools/mne-python#13738 · 5 comments · Opened Mar 11, 2026
Possible improvements to structuring of Decoding (MVPA) documentation Open

DOC

Difficulty 3/5 1-2 days Newbie friendliness 35/100

mne-tools/mne-python#13707 · 5 comments · Opened Feb 28, 2026
Type or doc improvement? Open

DOC

Difficulty 2/5 1-3 hours Newbie friendliness 48/100

mne-tools/mne-python#13689 · 7 comments · Opened Feb 25, 2026
Add tools script deps to a dev dependency group in `pyproject.toml` Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

mne-tools/mne-python#13683 · 1 comment · Opened Feb 24, 2026
Evaluate enabling `JupyterLite` support for selected sphinx-gallery examples Open

Difficulty 5/5 Over a week Newbie friendliness 32/100

mne-tools/mne-python#13660 · Opened Feb 15, 2026
Long-term API consistency issues (probably for a 2.0)? Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

mne-tools/mne-python#13640 · 2 comments · 7 reactions · Opened Feb 7, 2026
In `crop(tmin)` versus `get_data(tmin)`, `tmin` has a different meaning Open

BUG

Difficulty 3/5 1-2 days Newbie friendliness 62/100

mne-tools/mne-python#13634 · 10 comments · Opened Feb 4, 2026
Add option for reporting rank somewhere in mne.Report Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

mne-tools/mne-python#13621 · 2 comments · 1 reaction · Opened Jan 29, 2026
[Idea] Using Jupyterlite for interactive tutorials and workshops Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

mne-tools/mne-python#13616 · 22 comments · 1 reaction · Opened Jan 27, 2026
Type hints for `mne.preprocessing.ICA()` are narrower than their runtime behavior and documented usage. Open

BUG

Difficulty 2/5 1-3 hours Newbie friendliness 55/100

mne-tools/mne-python#13597 · 3 comments · Opened Jan 18, 2026
MCP server for mne-python Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

mne-tools/mne-python#13592 · 3 comments · Opened Jan 14, 2026
[RFC] new top-level website nav item "credits" Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

mne-tools/mne-python#13576 · 2 comments · 6 reactions · Opened Jan 5, 2026
[RFC] new top-level website nav item "about" Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

mne-tools/mne-python#13575 · 2 comments · 7 reactions · Opened Jan 5, 2026
commits from GHA bots don't trigger CircleCI jobs Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

mne-tools/mne-python#13560 · 1 comment · Opened Dec 23, 2025
Read DICOM EEG Open

ENH

Difficulty 5/5 Over a week Newbie friendliness 25/100

mne-tools/mne-python#13554 · 3 comments · Opened Dec 21, 2025

mne-tools/mne-python

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