MIT-LCP/mimic-code

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MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases

Stars: 3.4k
Forks: 1.7k
Open beginner issues: 1
Indexed issues: 286

Dominant language: Jupyter Notebook
License: MIT
Last GitHub push: Sep 1, 2026
Latest indexed: Sep 20, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed
PR merge metrics: No merged PRs in 30d

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286 open issues indexed

`charttime` seem to be wrong by over 1 year in `chartevents` in MIMIC IV Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

MIT-LCP/mimic-code#1694 · Opened Jan 17, 2024
Clarification on units of measurement Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1688 · 1 comment · Opened Jan 2, 2024
Suggestions for improving MIMIC-IV-NOTE content Open

Difficulty 2/5 1-3 hours Newbie friendliness 48/100

MIT-LCP/mimic-code#1686 · Opened Dec 31, 2023
Limited note categories in MIMIC-IV Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1678 · 1 comment · 4 reactions · Opened Dec 7, 2023
Next release of the MIMIC-IV Waveform Database Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

MIT-LCP/mimic-code#1668 · Opened Nov 13, 2023
Patients have edregtime in hosp, but no intime in the ED dataset. Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1666 · 1 comment · Opened Nov 7, 2023
Question about DRG Open

Difficulty 1/5 Under an hour Newbie friendliness 20/100

MIT-LCP/mimic-code#1665 · 1 comment · Opened Nov 2, 2023
Missing social history makes automated medical coding challenging Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

MIT-LCP/mimic-code#1663 · 1 comment · 1 reaction · Opened Oct 31, 2023
mimic3wdb-matched RECORDS file hast too many entries Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MIT-LCP/mimic-code#1658 · Opened Oct 13, 2023
Over 8% of chartevents have charttime > storetime Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1657 · 1 reaction · Opened Oct 11, 2023
ICU Daily Fluid Balance Mimic IV Open

Difficulty 2/5 1-3 hours Newbie friendliness 20/100

MIT-LCP/mimic-code#1648 · 1 comment · Opened Sep 23, 2023
tables seem to be created and compressed files loaded (step 6) but dataset dos not seem to be working (step 7) Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MIT-LCP/mimic-code#1645 · 4 comments · Opened Sep 17, 2023
MIMIC-IV notes on BigQuery Open

Difficulty 2/5 1-3 hours Newbie friendliness 20/100

MIT-LCP/mimic-code#1636 · 1 comment · Opened Sep 7, 2023
How can I extract LEVF and PAP from the MIMIC iii Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1631 · 1 comment · Opened Aug 28, 2023
Identify cardiac arrest event and occurrence time Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1629 · 1 comment · Opened Aug 24, 2023
Incomplete Extraction of Neonatal Blood Pressure and Oxygen Saturation Data - MIMIC III Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1623 · Opened Aug 10, 2023
Prevalence of machine manufacture models in the MIMIC-CXR database Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

MIT-LCP/mimic-code#1621 · Opened Aug 8, 2023
About missing vitalsigns in the MIMIC-IV ED Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1619 · Opened Aug 4, 2023
Inconsistence issue regarding the ventilation and dialysis duration between chartevents.csv and procedureevents.csv Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1615 · 1 comment · Opened Jul 31, 2023
Troubleshooting Slow MIMIC-III gz Data Import into PostgreSQL Database Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1609 · 4 comments · Opened Jul 29, 2023
Unique number of subject_ids does not match the number stated in documentation Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

MIT-LCP/mimic-code#1606 · 2 comments · Opened Jul 26, 2023
Potential bug: Question about heparin dosing Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1604 · 6 comments · Opened Jul 26, 2023
Time issue Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1599 · 1 comment · Opened Jul 22, 2023
missing icustay records Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1598 · 2 comments · Opened Jul 22, 2023
Difference in returned record when running the same query to obtain aki_stage_creat in MySQL and BigQuery (edit to previously closed issue) Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

MIT-LCP/mimic-code#1597 · Opened Jul 21, 2023
How to identify septic shock patients in mimic iv 2.2 database using sql code. Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

MIT-LCP/mimic-code#1595 · 1 reaction · Opened Jul 20, 2023
Repeated record in the POE table Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1589 · 1 comment · Opened Jul 17, 2023
Antibiotic Infusion Duration in MIMIC Database Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

MIT-LCP/mimic-code#1588 · Opened Jul 16, 2023
How to obtain urine volume for patients who are not admitted to the ICU Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

MIT-LCP/mimic-code#1586 · Opened Jul 11, 2023
Arterial vs. Venous blood in different lab measurements (CBC, Chemistry, Blood Gas) Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

MIT-LCP/mimic-code#1585 · 2 comments · Opened Jul 11, 2023
Building a db file on a subset of the MIMIC-III data Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

MIT-LCP/mimic-code#1579 · 5 comments · Opened Jul 5, 2023
charlson.sql Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1577 · Opened Jul 2, 2023
Duplicate signal in waveform data Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1574 · Opened Jun 22, 2023
Question about the number of patients in the oxygen_delivery table Open

Difficulty 3/5 1-2 days Newbie friendliness 55/100

MIT-LCP/mimic-code#1570 · 1 comment · Opened Jun 17, 2023
Question about the firstday sql and postgresql code, About the 6 hours. Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

MIT-LCP/mimic-code#1565 · 6 comments · Opened Jun 12, 2023
Unable to find beta-d-glucan laboratory results in MIMIC-IV despite test being mentioned in notes/radiology reports Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1562 · Opened Jun 6, 2023
Question about DRG codes in MIMIC-IV Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1561 · 3 comments · Opened Jun 5, 2023
Try to retrieve the procedures of CT scan with contrast Open

Difficulty 3/5 1-2 days Newbie friendliness 28/100

MIT-LCP/mimic-code#1556 · 1 comment · 1 reaction · Opened May 28, 2023
MIMIC Code Open

Difficulty 5/5 Over a week Newbie friendliness 1/100

MIT-LCP/mimic-code#1555 · 1 reaction · Opened May 25, 2023
Process for pinning physionet-data project on BigQuery has changed Open

Difficulty 2/5 1-3 hours Newbie friendliness 48/100

MIT-LCP/mimic-code#1553 · Opened May 22, 2023
Linking MIMIC-IV and MIMIC-CXR, under the {subject_id, hadm_id, stay_id} tuple key Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1552 · 1 comment · Opened May 20, 2023
ARCH-1 Labevent Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

MIT-LCP/mimic-code#1551 · Opened May 19, 2023
`DATETIME_DIFF` implementation varies between postgres and bigquery Open

Difficulty 3/5 1-2 days Newbie friendliness 63/100

MIT-LCP/mimic-code#1549 · 6 comments · Opened May 17, 2023
Disease names are anonymised Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

MIT-LCP/mimic-code#1548 · 1 comment · Opened May 16, 2023
How to calculate qsofa score from MIMIC iv Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1544 · 1 comment · Opened May 11, 2023
Delirium Assessment wrong itemids? Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

MIT-LCP/mimic-code#1542 · 2 comments · Opened May 5, 2023
what is the lab test name for itemid 50934 in labitems Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

MIT-LCP/mimic-code#1541 · 3 comments · Opened May 5, 2023
Zeroes in "valuenum" Open

Difficulty 4/5 3-5 days Newbie friendliness 15/100

MIT-LCP/mimic-code#1540 · 3 comments · Opened May 4, 2023
Huge inconsistencies in patientweight in inputevents Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

MIT-LCP/mimic-code#1539 · 3 comments · Opened May 4, 2023
Information of central venous catheter Open

Difficulty 4/5 3-5 days Newbie friendliness 15/100

MIT-LCP/mimic-code#1534 · Opened May 2, 2023

MIT-LCP/mimic-code

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