Arterial vs. Venous blood in different lab measurements (CBC, Chemistry, Blood Gas)
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Description
Hi, thanks for all the important work you all do on MIMIC.
I'm trying to compare glucose levels in Arterial and Venous blood.
For this purpose, I saw that for part of the Blood Gas measurements the specimen type (Arterial blood vs. Venous blood) is available (following the CHARTTIME's trick in #488, #1161 and bg.sql script).
However, for the rest of the glucose measurements (for example ITEMID=50931 of the chemistry measurement) I couldn't find any information on the specimen type and I wonder if it is possible to assess whether the blood was obtained from Arterial or Venous blood.
I thought it might be beneficial to use the following heuristic - First, generate the central line and arterial line durations based on the queries mentioned in #371, and then 'Map' each glucose measurement to Venous vs. Arterial based on the existence of the central/arterial line (I saw that there are overlapping in part of the rows, so I'll exclude these measurements).
Your comment/advice would be greatly appreciated!
Many thanks in advance,
Dan
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Research direction
Start with bg.sql and the queries referenced in #371, and review the related discussion in #488 and #1161. Compare the available blood-gas specimen information with chemistry measurements such as ITEMID=50931 and document whether arterial or venous origin can be assessed reliably; completion should include clear guidance for researchers.
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Assessment
- Tech stack
- sql
- Domain
- databases
- Issue type
- Documentation
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100