MIT-LCP / MIT-LCP/mimic-code

Clarification on units of measurement

Open
#1,688 1 comment 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
Jupyter Notebook
Stars
3.4k
Forks
1.7k
PR merge metrics
No merged PRs in 30d

Description

Prerequisites
Description

I'm hoping to receive clarification regarding the units for some specific lab, chart, and input events in the hospital and ICU database. Specifically, for the lab event id 50915 and chart event ids 229360, 227441 there are no conversions between different (seemingly non-equivalent) units of measurements when building the database. How are these events treated? There are also several inputs events (e.g. 225158, 228315, 225975, etc.) with multiple units, such as mg or dose, which are not referenced in the medications folder. Is it fine to assume all inputs are treated as binary events as this seems to be the case for most of the inputs? Thanks!

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Review the online documentation and the medications folder, then trace how lab event 50915, chart events 229360 and 227441, and the listed input events are handled. Done means documenting the units, conversions, and whether inputs with multiple units should be treated as binary events.

Written by the indexing model from the issue text.

Assessment

Domain
databases, documentation
Issue type
Documentation
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.