labthings / labthings/python-labthings

Automatic serialization/deserialization of Numpy arrays

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critical enhancement
Dominant language
Python
Stars
19
Forks
2
PR merge metrics
No merged PRs in 30d

Description

See https://gitlab.com/openflexure/openflexure-microscope-server/-/blob/master/openflexure_microscope/utilities.py#L25

We should introduce into the spec common scientific data types, and sensible ways to (de)serialize them.

Start with Numpy arrays (as we've already done this, see link above).

Discussion: What other scientific data types might be useful?

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Read the linked openflexure_microscope/utilities.py around line 25 to understand the existing NumPy array serialization, then inspect this project's specification and serialization paths. Done means the spec defines a sensible NumPy array representation and supports serialization and deserialization, with the treatment of other scientific data types left as a resolved discussion.

Written by the indexing model from the issue text.

Assessment

Tech stack
numpy, python
Domain
api, data
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
45/100

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