Owner

imicroseq

7 indexed repositories · View on GitHub

portal-ui
Canadian VirusSeq Data Portal

TypeScript · 8 stars
metadata-schemas
Repo to host Virus-seq metadata schemas defined using JSON Schema

JavaScript · 5 stars
singularity
Singularity - All Contributors, All Files

Java · 2 stars
pedigree

TypeScript · 2 stars
muse
Molecular Upload Submission sErvice

Java · 1 star
roadmap
Roadmap and planning for the Virus-Seq portal teams

0 stars
submission-service

TypeScript · 0 stars

Beginner friendly Everything

Open All

Song update version Open

Difficulty 2/5 1-3 hours Newbie friendliness 48/100

imicroseq/roadmap#180 · Opened Aug 25, 2026
Submission UI Improvement - Cancel Submission Button Open

imicroseq/roadmap#179 · 1 assignee · Opened Aug 24, 2026
Submission UI Improvement Open

Difficulty 3/5 1-2 days Newbie friendliness 55/100

imicroseq/roadmap#178 · Opened Aug 24, 2026
Submission UI Improvement - File Processing Open

imicroseq/roadmap#177 · 1 assignee · Opened Aug 24, 2026
User Access Control Open

Epic

Difficulty 5/5 Over a week Newbie friendliness 15/100

imicroseq/roadmap#176 · Opened Aug 18, 2026
Prod Submission Issue Open

imicroseq/roadmap#175 · 7 comments · 1 assignee · Opened Jul 22, 2026
Improve upload error message when CSV parsing fails due to mixed line endings Open

imicroseq/portal-ui#521 · 2 comments · 1 assignee · Opened Jul 20, 2026
Bug - Environmental Metadata TSV Export Contains Incorrect/Missing Column Names Open

imicroseq/roadmap#174 · 2 comments · 1 assignee · Opened Jun 1, 2026
Replace ViralAI With Internal Solution Open

imicroseq/roadmap#173 · 7 comments · 2 assignees · Opened Apr 15, 2026
Submitters Must Submit All Files Up Front Open

imicroseq/roadmap#171 · 1 comment · 1 assignee · Opened Apr 15, 2026
Bug - Application crashes with 502 error when submitting data through Swagger - file attachment not sent properly Open

Difficulty 2/5 1-3 hours Newbie friendliness 50/100

imicroseq/submission-service#19 · Opened Nov 10, 2025
Data Version Control Open

Epic

Difficulty 5/5 Over a week Newbie friendliness 20/100

imicroseq/roadmap#115 · Opened Aug 7, 2025
WasteWater Integration Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

imicroseq/roadmap#90 · Opened Jun 1, 2025
Data Redaction Request Open

imicroseq/portal-ui#459 · 1 comment · 2 assignees · Opened May 1, 2025
Data redaction request Open

imicroseq/portal-ui#455 · 2 comments · 1 assignee · Opened Apr 4, 2025
Data Redaction Request - New Brunswick Open

imicroseq/portal-ui#452 · 1 comment · 2 assignees · Opened Feb 18, 2025
Data Redaction Request - Newfoundland & labrador Open

imicroseq/portal-ui#451 · 1 comment · 2 assignees · Opened Feb 18, 2025
SK Update to Purpose of Sequencing Values Open

imicroseq/portal-ui#446 · 3 comments · 2 assignees · Opened Oct 8, 2024
Converting ph4ge waste water schema to lectern Open

imicroseq/metadata-schemas#39 · 1 comment · 1 assignee · Opened Aug 1, 2024
updates to info mailing list Open

imicroseq/portal-ui#443 · 2 comments · 1 assignee · Opened Jul 24, 2024
Column visibility Open

imicroseq/roadmap#49 · 1 assignee · Opened Jul 11, 2024
Download Dataset Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

imicroseq/roadmap#48 · Opened Jul 11, 2024
Facet Filters List Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

imicroseq/roadmap#47 · Opened Jul 11, 2024
Explore Data Page for Wastewater Open

Epic

Difficulty 5/5 Over a week Newbie friendliness 20/100

imicroseq/roadmap#46 · Opened Jul 11, 2024
Modify Data Portal - Wastewater Open

Epic

Difficulty 5/5 Over a week Newbie friendliness 25/100

imicroseq/roadmap#44 · Opened Jul 11, 2024
Replace Redis, which is not closed-source Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

imicroseq/pedigree#31 · Opened May 22, 2024
submission schema validation error Open

imicroseq/portal-ui#412 · 1 assignee · Opened Sep 20, 2023
Quicksearch by GISAID accession Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

imicroseq/portal-ui#406 · 1 comment · Opened Aug 23, 2023
make Submission error messages less verbose Open

enhancement minor

Difficulty 3/5 1-2 days Newbie friendliness 35/100

imicroseq/portal-ui#397 · 1 comment · Opened Jul 31, 2023
Allow passing TSV columns through environment variables Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

imicroseq/singularity#91 · Opened Apr 20, 2023
Fix Keycloak logout parameters Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

imicroseq/portal-ui#378 · Opened Mar 31, 2023
Explaination of scorpio call Open

blocked enhancement

imicroseq/portal-ui#362 · 3 comments · 1 assignee · Opened Jan 24, 2023
Failed Build Archive releases in Prod Open

imicroseq/singularity#80 · 4 comments · 1 assignee · Opened Dec 7, 2022
performance improvements Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

imicroseq/pedigree#10 · Opened Dec 1, 2022
Create an SOP for schema version upgrade Open

documentation

imicroseq/roadmap#38 · 1 assignee · Opened Nov 7, 2022
Geographic maps of cases, optionally filtered by lineage. Open

specs-needed

Difficulty 5/5 Over a week Newbie friendliness 20/100

imicroseq/portal-ui#314 · Opened Aug 12, 2022
Timeline graphs of cases, optionally filtered by lineage. Open

specs-needed

Difficulty 5/5 Over a week Newbie friendliness 15/100

imicroseq/portal-ui#313 · Opened Aug 12, 2022
Split Data Release Bundle in to multiple gzips Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

imicroseq/singularity#42 · 3 comments · Opened Jul 29, 2022
Provide Separate TSV file for Data Release Bundles Open

imicroseq/singularity#41 · 1 assignee · Opened Jul 20, 2022
Download Dataset(fasta) fails intermittently on the Explorer Page Open

bug

imicroseq/portal-ui#287 · 1 comment · 1 assignee · Opened Jul 13, 2022
Provide isolated Metadata downloading functionality Open

imicroseq/portal-ui#282 · 1 comment · 1 assignee · Opened Jul 12, 2022
Compress tsv file before download Open

on hold ui/ux

imicroseq/portal-ui#272 · 1 comment · 1 assignee · Opened Jun 27, 2022
Sample Collected date is one day offset earlier/before the user-provided date Open

bug minor

imicroseq/portal-ui#259 · 2 comments · 1 assignee · Opened Jun 8, 2022
Change to xz compression for downloads Open

enhancement minor WP_1

Difficulty 3/5 1-2 days Newbie friendliness 30/100

imicroseq/portal-ui#236 · 3 comments · 1 reaction · Opened Apr 12, 2022
Investigate: Improve Design to Handle Large Downloads Open

critical enhancement specs-needed WP_1

Difficulty 5/5 Over a week Newbie friendliness 20/100

imicroseq/portal-ui#222 · 2 comments · Opened Mar 29, 2022
Add get endoints to find uploads by id Open

enhancement

imicroseq/muse#87 · 1 comment · 1 assignee · Opened Feb 28, 2022
explore adding patient and specimen id Open

awaiting-details minor on hold WP_1

Difficulty 5/5 Over a week Newbie friendliness 20/100

imicroseq/portal-ui#197 · 2 comments · Opened Feb 22, 2022
Kafka upgrade Open

imicroseq/roadmap#33 · 1 comment · 1 assignee · Opened Dec 17, 2021
REST api or similar to acquire data Open

help wanted specs-needed WP_1

Difficulty 4/5 3-5 days Newbie friendliness 28/100

imicroseq/portal-ui#160 · 4 comments · Opened Dec 14, 2021
Adding a "news/announcements" section (FR) Open

enhancement minor WP_1

Difficulty 5/5 Over a week Newbie friendliness 20/100

imicroseq/portal-ui#158 · 3 comments · Opened Dec 14, 2021

imicroseq

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