cortex-lab/alyx

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Database for experimental neuroscience laboratories

Stars: 52
Forks: 12
Open beginner issues: 0
Indexed issues: 70
Avg merge: 1d 11h
Merged PRs (30d): 4

Dominant language: Python
License: No license data
Last GitHub push: Aug 28, 2026
Latest indexed: Sep 20, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed

Beginner friendly Everything

Open All

70 open issues indexed

WSGI undermines throttle limits Open

Difficulty 4/5 3-5 days Newbie friendliness 45/100

cortex-lab/alyx#1054 · Opened Sep 18, 2026
Make db fields independent of IO Open

Difficulty 4/5 3-5 days Newbie friendliness 52/100

cortex-lab/alyx#1045 · Opened Sep 11, 2026
Subject lookup by UUID Open

cortex-lab/alyx#1032 · 1 assignee · Opened Jul 29, 2026
Simplify install documentation Open

doc enhancement

cortex-lab/alyx#1016 · 3 comments · 1 assignee · Opened Jul 21, 2026
Improve Alyx release and deploy process Open

enhancement

cortex-lab/alyx#1015 · 2 assignees · Opened Jul 21, 2026
PyRAT compatibility Open

enhancement feature usability

Difficulty 5/5 Over a week Newbie friendliness 35/100

cortex-lab/alyx#1009 · Opened Jul 2, 2026
How to cite Open

Difficulty 2/5 1-3 hours Newbie friendliness 68/100

cortex-lab/alyx#1008 · 1 reaction · Opened Jul 2, 2026
Updating Alyx from V3.03 Open

cortex-lab/alyx#997 · 4 comments · 1 assignee · Opened Apr 23, 2026
Alyx compatible with Django 6 Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

cortex-lab/alyx#963 · Opened Dec 3, 2025
Set a constraint on sessions to avoid multiple sessions (if feasible) Open

cortex-lab/alyx#942 · 2 comments · 1 assignee · Opened Aug 20, 2025
feature request: select cull reason directly from cull_subjects page Open

cortex-lab/alyx#924 · 1 assignee · Opened Apr 17, 2025
feature request: analgesic/anesthetic administration table Open

feature

cortex-lab/alyx#914 · 2 comments · 1 assignee · Opened Feb 14, 2025
Subject request page not updating Open

cortex-lab/alyx#905 · 3 comments · 1 assignee · Opened Jan 29, 2025
Alyx Subject request page not updating Open

cortex-lab/alyx#904 · 1 assignee · Opened Jan 29, 2025
Chronic insertions view in need of optimization Open

enhancement refactor rest-api

cortex-lab/alyx#894 · 2 comments · 1 assignee · Opened Jan 6, 2025
Admin interface columns justification for sequence results Open

Difficulty 2/5 1-3 hours Newbie friendliness 45/100

cortex-lab/alyx#892 · Opened Jan 3, 2025
Formalize husbandry group permissions Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

cortex-lab/alyx#884 · Opened Nov 20, 2024
Document Alyx user permissions system Open

doc enhancement usability

Difficulty 3/5 1-2 days Newbie friendliness 50/100

cortex-lab/alyx#883 · Opened Nov 20, 2024
REST requests should mirror Alyx user group permissions Open

enhancement epic refactor rest-api

Difficulty 5/5 Over a week Newbie friendliness 35/100

cortex-lab/alyx#882 · Opened Nov 20, 2024
ModuleNotFoundError: No module named 'alyx.settings' Open

cortex-lab/alyx#717 · 2 comments · 1 assignee · Opened Jan 27, 2022
add dataset existing in a NAS via url endpoint Open

cortex-lab/alyx#684 · 11 comments · 1 assignee · Opened May 24, 2021
Superuser status is required for some basic Alyx functions? Open

question

cortex-lab/alyx#657 · 2 comments · 1 assignee · Opened Aug 28, 2020
Add Cage autoname feature & uniqueness requirement Open

question

cortex-lab/alyx#656 · 2 comments · 1 assignee · Opened Aug 28, 2020
Subject autoname option not present Open

question

cortex-lab/alyx#655 · 2 comments · 1 assignee · Opened Aug 28, 2020
When I add a litter, I cannot figure out how to indicate the specific genotyping protocol Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

cortex-lab/alyx#651 · Opened Aug 19, 2020
Enhancements: more editing abilities and calendar reminder system Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

cortex-lab/alyx#647 · Opened Aug 9, 2020
Extending Alyx Open

question

cortex-lab/alyx#635 · 15 comments · 1 assignee · Opened Apr 20, 2020
Session gets created in db even when request error response Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

cortex-lab/alyx#634 · Opened Apr 15, 2020
Weekend water error? Open

bug

cortex-lab/alyx#627 · 4 comments · 1 assignee · Opened Feb 17, 2020
Adding zygosities info on the cull subjects page Open

usability

cortex-lab/alyx#622 · 1 assignee · Opened Jan 17, 2020
Removing culled animals from Breeding Page Open

usability

cortex-lab/alyx#621 · 1 assignee · Opened Jan 17, 2020
Perfusion data entry Open

schema-change

cortex-lab/alyx#620 · 8 comments · 1 assignee · Opened Jan 15, 2020
Comit hash in admin page Open

enhancement

cortex-lab/alyx#616 · 2 assignees · Opened Dec 9, 2019
Confirmation before posting weight values that'll generate an email Open

feature

cortex-lab/alyx#614 · 1 assignee · Opened Dec 4, 2019
Weight before session field empty Open

bug

cortex-lab/alyx#608 · 1 assignee · Opened Nov 18, 2019
Multiple entry for Project code Open

enhancement

cortex-lab/alyx#606 · 3 comments · 1 assignee · Opened Nov 18, 2019
New Alyx user: dummy data Open

question

cortex-lab/alyx#605 · 5 comments · 1 assignee · Opened Nov 8, 2019
Alyx paths relative to root dir Open

question schema-change

cortex-lab/alyx#600 · 7 comments · 1 assignee · Opened Oct 7, 2019
Sessions end point query filters Open

enhancement question

cortex-lab/alyx#599 · 1 assignee · Opened Oct 7, 2019
Full sync of Cull objects from UCL to IBL Open

priority: low

cortex-lab/alyx#594 · 1 assignee · Opened Sep 26, 2019
'lab notebook' view Open

feature

cortex-lab/alyx#589 · 1 reaction · 1 assignee · Opened Sep 20, 2019
E-mail notifications Open

question

cortex-lab/alyx#588 · 1 assignee · Opened Sep 20, 2019
location of mouse? Open

question schema-change

cortex-lab/alyx#586 · 3 comments · 1 assignee · Opened Sep 19, 2019
Experimenter may be required to be blind about mouse data Open

feature

cortex-lab/alyx#584 · 1 comment · 1 assignee · Opened Sep 19, 2019
Pretty float print in water administrations page for water_administered field Open

usability

cortex-lab/alyx#581 · 1 assignee · Opened Sep 6, 2019
alert user when weight logged is outside a reasonable range Open

email priority: low

cortex-lab/alyx#575 · 1 assignee · Opened Aug 27, 2019
Project _iblrig_tasks_biasedScanningChoiceWorld5.2.3 appears on multiple user and test mouse Open

question

cortex-lab/alyx#572 · 1 assignee · Opened Aug 9, 2019
Select multiple objects as part of cage enrichment Open

schema-change

cortex-lab/alyx#571 · 1 comment · 1 assignee · Opened Aug 5, 2019
Search for mice associated to a given project Open

easy usability

cortex-lab/alyx#566 · 1 assignee · Opened Jul 26, 2019
adding multiple images at once Open

priority: low usability

cortex-lab/alyx#563 · 2 assignees · Opened Jul 22, 2019

cortex-lab/alyx

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