Perfusion data entry
Open
@rossant is already working on this.
Since Jan 21, 2020.
schema-change
- Dominant language
- Python
- Stars
- 52
- Forks
- 12
- Avg merge
- 1d 11h
- Merged PRs (30d)
- 4
Description
The histology WG noted that there is some variability in the auto-fluorescence brightness signal. There seems to be some unknown cause of protocol discrepancy. To help us tackling this, we would like to add some fields, notably:
- The PFA solution
- The goodness of the perfusion (how to assess and label is under debate)
- Transport time + temperature (e.g. room temperature or on ice)
- Time from perfusion to microscopy imaging (can be computed using death date and 'imaging date', if existing in the database upon histology session loading)
Exact implementation to be discussed.
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Assessment
This issue has not been assessed yet.