biocore/microsetta-private-api

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A private microservice to support The Microsetta Initiative

Stars: 6
Forks: 18
Open beginner issues: 0
Indexed issues: 63

Dominant language: Python
License: BSD-3-Clause
Last GitHub push: Apr 3, 2026
Latest indexed: Sep 14, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed
PR merge metrics: No merged PRs in 30d

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63 open issues indexed

Reduce magic values from query returns Open

enhancement

biocore/microsetta-private-api#3 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Docstrings Open

codebase quality documentation

biocore/microsetta-private-api#8 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Use of super() Open

invalid

biocore/microsetta-private-api#9 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Object hooks and isinstance tests Open

question

biocore/microsetta-private-api#10 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
'Lock down' api with additionalProperties and required Open

bug priority yaml

biocore/microsetta-private-api#18 · 2 comments · 0 reactions · 1 assignee · Indexed Sep 14, 2026
Decide on and implement consistent repo-level error reporting approach Open

biocore/microsetta-private-api#31 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Store more nuanced info on deceased parents Open

enhancement someday

biocore/microsetta-private-api#35 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
[WIP] API Integration Testing Open

biocore/microsetta-private-api#37 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Support delete and possibly edit of survey answers Open

biocore/microsetta-private-api#48 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Figure out how to remove duplication in `source` examples in yaml Open

someday

biocore/microsetta-private-api#52 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Spanish Translations Open

biocore/microsetta-private-api#53 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Store language tag in db whenever a user passes in free text Open

biocore/microsetta-private-api#63 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Move LEGACY/locale_data to filesystem/database Open

enhancement

biocore/microsetta-private-api#66 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Migrate survey_response natural language keys to ids per question Open

enhancement

biocore/microsetta-private-api#67 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Create a Small Test Database Open

enhancement someday

biocore/microsetta-private-api#69 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Refactor Hardcoded Error Messages Open

enhancement someday

biocore/microsetta-private-api#70 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Validate source_type for survey routes Open

biocore/microsetta-private-api#71 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Get Departure decision on whether to put language_tag in returned Location headers Open

biocore/microsetta-private-api#72 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Discussion item: sample to source relationships Open

biocore/microsetta-private-api#73 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Discussion item: policy for checking upstream IDs Open

biocore/microsetta-private-api#75 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Discussion item: repo layer refactor for exception and non-exception throwing methods Open

enhancement

biocore/microsetta-private-api#76 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Comment request regarding unexpected behavior of objects Open

documentation someday

biocore/microsetta-private-api#77 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Disallow Create Human Source From Direct Post Open

enhancement yaml

biocore/microsetta-private-api#80 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Extend test db to include a made-up kit with unassigned sample(s) and put its kit name in yaml as example Open

documentation yaml

biocore/microsetta-private-api#82 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Explore if `validate_access` can be expressed as a decorator Open

biocore/microsetta-private-api#93 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Admin endpoints Open

biocore/microsetta-private-api#104 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Lock Down Schemas On Admin Endpoints Open

biocore/microsetta-private-api#111 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Fix Transaction Scoping Open

enhancement

biocore/microsetta-private-api#115 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
build_db not idempotent Open

biocore/microsetta-private-api#122 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Survey Template Indeterminate When No Questions Answered Open

biocore/microsetta-private-api#132 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Bulk Request Error Handling with ApiRequest Open

minimalInterface

biocore/microsetta-private-api#160 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Consider how to properly expose private api object keys names for use in minimal interface Open

minimalInterface

biocore/microsetta-private-api#194 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Centralize string literals for e.g. account form variables Open

minimalInterface

biocore/microsetta-private-api#195 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Mechanism to disable login Open

minimalInterface

biocore/microsetta-private-api#217 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Email Notifications from 'no-reply@microsetta.ucsd.edu' Open

biocore/microsetta-private-api#262 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Improve handling of extensive list of fields in Project model/project table Open

enhancement

biocore/microsetta-private-api#264 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Participant driven scheduling for taking external surveys Open

biocore/microsetta-private-api#282 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
ag.source_barcodes_surveys is missing a UNIQUE constraint Open

biocore/microsetta-private-api#294 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Vioscreen state transforms Open

biocore/microsetta-private-api#304 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Unpin openapi-spec-validator Open

biocore/microsetta-private-api#305 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
ag.vioscreen_registry deleted is not reset if the sample is reclaimed Open

biocore/microsetta-private-api#306 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Support activation codes Open

biocore/microsetta-private-api#309 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Specify CultureCode on remote_login.aspx call with viocare Open

biocore/microsetta-private-api#326 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 14, 2026
Vioscreen session pulls observing a 1005 code error Open

biocore/microsetta-private-api#334 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Column names should use i18n codes Open

biocore/microsetta-private-api#336 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Handle the ways weight and height freetext are stored in the database for vioscreen handoff Open

biocore/microsetta-private-api#338 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Mechanism to allow a user to update their email Open

biocore/microsetta-private-api#358 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Vioscreen timeout on auth tokens Open

biocore/microsetta-private-api#363 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026
When BadRequest is raised, we don't observe traceback in our log files Open

biocore/microsetta-private-api#366 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 14, 2026
Remove connexion version <= 2.7.0 limit after working around mock issue with newer connexion Open

biocore/microsetta-private-api#369 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 14, 2026

biocore/microsetta-private-api

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