biocore/LabControl

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lab manager for plate maps and sequence flows

Stelle: 2
Fork: 15
Issue aperte per principianti: 0
Issue indicizzate: 123

Lingua principale: Python
Licenza: BSD-3-Clause
Ultimo push su GitHub: 12/9/2019
Ultima indicizzazione: 14/9/2026
Guida per i contributori: Nessuna guida per i contributori
Codice di condotta: Nessun codice di condotta
Label per principianti: Nessuna label per principianti indicizzata
Metriche di merge delle PR: Nessuna PR unita negli ultimi 30g

Aperta Tutte

123 issue aperte indicizzate

Add parameter to track number of times a lot, primer plate, etc is used and a way to warn if too many uses Aperta

feature request scope:large

biocore/LabControl#31 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Highlight cells per study Aperta

feature request scope:medium

biocore/LabControl#52 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Implement repooling functionality Aperta

feature request scope:large

biocore/LabControl#53 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Create an interface that, given a plate, provides its ancestry and descendency Aperta

feature request priority:medium scope:large

biocore/LabControl#77 · 11 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Refactor backend to rename 16S to amplicon Aperta

code refactor scope:medium

biocore/LabControl#91 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Add comment box in gDNA plate extraction Aperta

feature request scope:medium

biocore/LabControl#128 · 3 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Implement unit tests for javascript functionality Aperta

code refactor priority:high scope:large

biocore/LabControl#171 · 4 commenti · 0 reazioni · 1 assegnatario · Indicizzata il 14/9/2026
Stress test the software Aperta

enhancement priority:high scope:large

biocore/LabControl#173 · 7 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Idea: Is there any way to integrate a biosafetly level warning button that goes away once the samples are extracted? Aperta

feature request scope:unknown

biocore/LabControl#179 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
export all plate maps from a single study to a tsv/excel file Aperta

feature request scope:unknown

biocore/LabControl#190 · 2 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Ensure that data duplication by "contents" field in sample_composition is acceptable Aperta

code refactor priority:high scope:large

biocore/LabControl#220 · 3 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Add ENV_package to sample sheet Aperta

feature request priority:high scope:medium

biocore/LabControl#227 · 22 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Make a more generalized 'upstream' connector in composition objects/tables? Aperta

code refactor scope:large

biocore/LabControl#234 · 11 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Change sample sheet Sample_ID and Sample_Name to use actual sample id instead of sample "content"? Aperta

enhancement scope:small wontfix

biocore/LabControl#237 · 5 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Add comments to multiple wells based on selection Aperta

feature request scope:large

biocore/LabControl#244 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Add tooltips to pooling interface to explain parameter values Aperta

feature request front-end priority:medium scope:small

biocore/LabControl#249 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
for gDNA plate compression, add diagram to output Aperta

feature request scope:medium

biocore/LabControl#252 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Prevent creation of sequencing runs without all lanes filled Aperta

feature request scope:small wontfix

biocore/LabControl#261 · 3 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Consolidate "components" attribute logic in PoolingProcess and PoolComposition Aperta

code refactor priority:low scope:small

biocore/LabControl#265 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Move definition of number of lanes per sequencer into database from SequencingProcess Aperta

code refactor priority:low scope:medium

biocore/LabControl#266 · 6 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
View, modify, and search well contents of multiple plates at same time during sample plating Aperta

feature request priority:medium scope:large

biocore/LabControl#285 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Add Primer Date selection in Prepare Amplicon Libraries Aperta

feature request priority:low training wontfix

biocore/LabControl#289 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Verify correct display of blanks in quantitation heatmap and add legend explaining Aperta

enhancement front-end priority:medium scope:small

biocore/LabControl#292 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Determine how wet lab models inputs for amplicon pool library plates and decide on interface changes to address Aperta

enhancement front-end scope:medium scope:small

biocore/LabControl#293 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Update labeling on Prepare Amplicon Sequencing Pool page Aperta

enhancement front-end priority:medium scope:small

biocore/LabControl#294 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Allow filtering by plate type in all plate selection steps Aperta

feature request priority:high scope:medium

biocore/LabControl#297 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Add labeling on PicoGreen Quantification page indicating expected format for files to be uploaded Aperta

enhancement front-end priority:medium scope:small

biocore/LabControl#298 · 4 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Clarify save status of sample plating in interface Aperta

enhancement front-end priority:low scope:small

biocore/LabControl#302 · 2 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Clarify meaning or change iconography for red "remove plate" Xs in interface Aperta

enhancement front-end priority:medium scope:small

biocore/LabControl#304 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Explicitly indicate which plates go in which quadrant during gDNA compression Aperta

feature request front-end priority:high scope:medium

biocore/LabControl#305 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Reposition or clarify location of Download buttons in interface Aperta

enhancement front-end priority:medium scope:small

biocore/LabControl#306 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Clarify labeling of volume field on Prepare Shotgun Libraries page Aperta

enhancement front-end priority:high scope:small

biocore/LabControl#308 · 2 commenti · 0 reazioni · 1 assegnatario · Indicizzata il 14/9/2026
Remove or otherwise deprecate "destination tube" field on Pool Library Plates page Aperta

feature request priority:high scope:small

biocore/LabControl#310 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Relabel and provide convention guidance for "Run Name" and "Run Experiment" on Prepare Sequencing Run page Aperta

enhancement front-end priority:medium scope:small

biocore/LabControl#311 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Clarify in interface how to re-view existing quantitations Aperta

enhancement front-end priority:medium scope:small

biocore/LabControl#312 · 3 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Allow lab to pick which lane a pool goes into on Prepare Sequencing Run page Aperta

feature request priority:high scope:small

biocore/LabControl#313 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Improve labeling, activation for well comments in Plate Samples Aperta

enhancement feature request front-end priority:high scope:small

biocore/LabControl#314 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Fix "reformat" option in Normalize gDNA Plates Aperta

bug priority:high scope:small

biocore/LabControl#323 · 3 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Extend Preparation Info file to have an Ext_robot_EP column and an Ext_robot_KF column instead of a single Extraction_robot column Aperta

feature request priority:high scope:small

biocore/LabControl#324 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Capture sequencing run prep information and insert into prep file Aperta

feature request scope:large

biocore/LabControl#333 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Improve GUI display of unexpected errors Aperta

enhancement priority:low scope:medium

biocore/LabControl#338 · 2 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Determine correct volume for wells in new gDNA compression plate Aperta

code refactor priority:medium scope:small

biocore/LabControl#341 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Support generating prep info files for non-Illumina sequencing runs Aperta

feature request scope:large

biocore/LabControl#342 · 2 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Warn user if prep info file contains duplicate samples Aperta

feature request priority:medium scope:medium

biocore/LabControl#343 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Warn if number of physical samples doesn't match number of samples with metadata Aperta

feature request priority:low scope:large

biocore/LabControl#344 · 1 commento · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Change labman.well table to store row_num and col_num as zero-based Aperta

code refactor scope:medium

biocore/LabControl#345 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Configuration manager defaults point to non-existent folder Aperta

bug priority:high scope:small

biocore/LabControl#347 · 0 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026
Prevent silent timeout failure when computing pool values on "Pool library plates" page Aperta

bug priority:high scope:unknown

biocore/LabControl#361 · 5 commenti · 0 reazioni · 1 assegnatario · Indicizzata il 14/9/2026
Allow viewing of pooling settings for an existing pool made from "Pool library plates" OR "Prepare amplicon sequencing pool" Aperta

feature request priority:high scope:large

biocore/LabControl#362 · 4 commenti · 0 reazioni · 1 assegnatario · Indicizzata il 14/9/2026
Require run names to be unique or display create time Aperta

feature request priority:high scope:small

biocore/LabControl#365 · 3 commenti · 0 reazioni · 0 assegnatari · Indicizzata il 14/9/2026

biocore/LabControl

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