issue using sctk package for geom2trace function
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- Dominant language
- R
- Stars
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Description
While executing SCTK pipeline (using the newest docker image, see : https://sctk.bu.edu/app/SingleCellTK), I encountered following issue trying to plot different UMAP visualizations.
UMAP Complete
Warning in geom2trace.default(dots[[1L]][[1L]], dots[[2L]][[1L]], dots[[3L]][[1L]]) :
geom_GeomTextRepel() has yet to be implemented in plotly.
If you'd like to see this geom implemented,
Please open an issue with your example code at
I would like to ask if this functionality can be considered for next update of the software?
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the SCTK UMAP visualization that triggers geom2trace.default and the geom_GeomTextRepel warning in the newest Docker image. The payload names no source files or tests, so locate the geom2trace implementation and existing geom handlers first; done means this geom is supported without the reported warning.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- plotly, r
- Domain
- data-visualization
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100