pharmaverse/logrx

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Tools to facilitate logging in a clinical environment with the goal of making code easily traceable and reproducible.

Stars: 48
Forks: 12
Open beginner issues: 0
Indexed issues: 36
Avg merge: 20d 8h
Merged PRs (30d): 1

Dominant language: HTML
License: No license data
Last GitHub push: Sep 14, 2026
Latest indexed: Sep 19, 2026
Contributing guide: Contributing guide
Code of conduct: Code of conduct
Beginner labels: No beginner labels indexed

Beginner friendly Everything

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36 open issues indexed

Documentation: Update to focus execution examples on `axecute()` calls Open

documentation

Difficulty 2/5 1-3 hours Newbie friendliness 58/100

pharmaverse/logrx#300 · Opened Jul 6, 2026
Pharamaverse Hackathon Prep Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

pharmaverse/logrx#299 · 5 comments · Opened Jul 6, 2026
Check on log_write and use of deprecated arugment Open

Difficulty 3/5 1-2 days Newbie friendliness 65/100

pharmaverse/logrx#298 · Opened Jul 6, 2026
Update maintainer email for logrxaddin Open

Difficulty 2/5 1-3 hours Newbie friendliness 35/100

pharmaverse/logrx#297 · Opened Jun 15, 2026
Ensure logrx addin works with logrx updates Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/logrx#296 · Opened Jun 15, 2026
Rework logrx to minimize dependencies Open

pharmaverse/logrx#294 · 1 reaction · 2 assignees · Opened Apr 19, 2026
Bug: 运行命令'"quarto" TMPDIR=C:/Users/user/AppData/Local/Temp/RtmpUBKOBO/filef38f9041d3 -V'的状态是1 Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 30/100

pharmaverse/logrx#293 · 7 comments · Opened Apr 14, 2026
Feature Request: Consider writing Claude code skill for logrx Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 25/100

pharmaverse/logrx#292 · Opened Apr 1, 2026
Update "A few words of caution" to include info on overload operators Open

pharmaverse/logrx#291 · 2 comments · 1 assignee · Opened Mar 18, 2026
Feature Request: logrx working with parallel processing Open

enhancement

pharmaverse/logrx#289 · 3 comments · 1 reaction · 1 assignee · Opened Mar 5, 2026
Write tests for .Renvivron and .Rprofile Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

pharmaverse/logrx#286 · Opened Feb 25, 2026
Clean up tests outputs/prints/messages/etc Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/logrx#284 · 1 comment · Opened Feb 25, 2026
Feature Request: Build in option to use callr rather than source Open

enhancement

pharmaverse/logrx#279 · 4 comments · 1 assignee · Opened Feb 11, 2026
Positron/VS Code Plugin to complement logrx Addin Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 25/100

pharmaverse/logrx#277 · Opened Jan 28, 2026
Bug: Invisibly returned objects are printed in the log Open

bug

pharmaverse/logrx#275 · 1 assignee · Opened Dec 3, 2025
Feature Request: request to export `run_safely_loudly` function in logrx Open

enhancement

pharmaverse/logrx#273 · 3 comments · 1 assignee · Opened Sep 1, 2025
Bug: mislabeling of used packages in the logs due to `get_used_functions` Open

bug

pharmaverse/logrx#272 · 2 comments · 1 assignee · Opened Aug 29, 2025
Bug: Package detection failure for backtick-quoted functions in `get_used_functions` Open

bug

pharmaverse/logrx#271 · 4 comments · 1 assignee · Opened Aug 28, 2025
Bug: Errors not captured in log files when using logrx::axecute() Open

bug

pharmaverse/logrx#270 · 6 comments · 1 reaction · 1 assignee · Opened Aug 25, 2025
Fragile tests relying on exact messaging of lintr output Open

bug

Difficulty 2/5 1-3 hours Newbie friendliness 52/100

pharmaverse/logrx#231 · Opened Feb 12, 2025
Bug: functions passed to `rlang::exprs` in an R script are not found Open

bug

pharmaverse/logrx#259 · 20 comments · 1 assignee · Opened Oct 3, 2024
Feature Request: Include stack trace of error in log Open

enhancement

pharmaverse/logrx#224 · 4 comments · 1 reaction · 1 assignee · Opened Sep 5, 2024
Feature Request: Consider capturing recursive dependencies for packages used Open

enhancement

pharmaverse/logrx#211 · 1 comment · 2 assignees · Opened Sep 18, 2023
surface keys as argument/option to control log content Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

pharmaverse/logrx#206 · Opened Aug 30, 2023
Feature Request: Option to error if unapproved package is used Open

enhancement

pharmaverse/logrx#204 · 2 comments · 1 reaction · 1 assignee · Opened Aug 22, 2023
Feature Request: Ensure logrx works with quarto docs (qmd files) Open

enhancement

pharmaverse/logrx#201 · 2 comments · 1 assignee · Opened Aug 21, 2023
Feature Request: List approved packages and functions in yaml file Open

enhancement

pharmaverse/logrx#199 · 6 comments · 1 reaction · 1 assignee · Opened Aug 11, 2023
Feature Request: Surface run_safely_loudly() Open

enhancement

Difficulty 3/5 1-2 days Newbie friendliness 62/100

pharmaverse/logrx#193 · 2 comments · Opened Jul 13, 2023
`...` additional options in axecute and pass to `render` and `source` Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

pharmaverse/logrx#192 · 4 comments · Opened Jul 6, 2023
Feature Request: Move list of log fields to unified place Open

enhancement

pharmaverse/logrx#183 · 1 assignee · Opened Jun 22, 2023
Documentation: Increase visibility of results using print statements Open

documentation

pharmaverse/logrx#178 · 1 comment · 1 assignee · Opened Jun 12, 2023
Feature Request: Provide option to reject a script if using unapproved packages Open

enhancement

pharmaverse/logrx#168 · 8 comments · 1 assignee · Opened Mar 3, 2023
Feature Request: Explore ability to generate a docker image from a log Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/logrx#165 · 2 comments · Opened Feb 15, 2023
Feature Request: Add ability to easily subset/filter log files Open

enhancement

Difficulty 5/5 Over a week Newbie friendliness 20/100

pharmaverse/logrx#162 · 8 comments · 1 reaction · Opened Feb 14, 2023
Bug: Warning() at end of file overrides result Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 55/100

pharmaverse/logrx#160 · 5 comments · Opened Feb 9, 2023
Feature Request: Log Stream Open

enhancement

pharmaverse/logrx#98 · 6 comments · 1 assignee · Opened Jun 20, 2022

pharmaverse/logrx

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