nmwsharp / nmwsharp/polyscope

Running polyscope on remote servers [python]

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Descrizione

context

I am trying to run the python polyscope library in a headless environment (running some tests in CI); but that has presented some challenges. This issue is the same underlying cause as #82 .

Environment

  • docker container
  • OS: ubuntu
  • Python 3.8.6
  • Polyscope: 0.1.6

polyscope installed with: python -m pip install polyscope

Partial fixes

I worked through a couple of issues but couldn't get everything working (yet):

apt-get install -y libglfw3-dev
apt-get install -y xvfb
export DISPLAY=:99.0
Xvfb :99 -screen 0 1024x768x24 > /dev/null 2>&1 &

There error I get when running python -c "import polyscope as ps; ps.init() is the following:

[polyscope] Backend: openGL3_glfw -- Loaded openGL version: 3.3 (Core Profile) Mesa 18.3.6
[polyscope] Polyscope OpenGL Error!  Type: Invalid enum
GLError() after shader compilation! Program text:


// tag ${ GLSL_VERSION }$
// from rule: GLSL_VERSION
#version 330 core

      in vec3 a_position;
      out vec2 tCoord;

      void main()
      {
          tCoord = (a_position.xy+vec2(1.0,1.0))/2.0;
          gl_Position = vec4(a_position,1.);
      }

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
    psb.init(backend)
RuntimeError: OpenGl error occurred. Text: Invalid enum
[1] + Done(1)                    Xvfb :99 -screen 0 1024x768x24 1>/dev/null 2>&1

I've put the debugging process I've been through so far and would appreciate any tips on where to go next.

Thanks for an already fantastic project! Keep up the great work 😀

Missing glfw

The first error you might encounter when running polyscope in a headless environment is a missing glfw the error looks like issue #82:
running the command: python -c "import polyscope as ps; ps.init() throws the following error:

backend = ''

    def init(backend=""):
        """Initialize Polyscope"""
    
        cwd_before = os.getcwd() # see note below
    
>       psb.init(backend)
E       RuntimeError: [polyscope] ERROR: Failed to initialize glfw

/opt/conda/envs/test/lib/python3.8/site-packages/polyscope/core.py:12: RuntimeError
Fix on ubuntu

The fix to that is to install glfw

sudo apt-get install libglfw3

Missing display

re-running the command: python -c "import polyscope as ps; ps.init()" throws the following error:

GLFW emitted error: X11: The DISPLAY environment variable is missing
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
    psb.init(backend)
RuntimeError: [polyscope] ERROR: Failed to initialize glfw

v

Adding a display (to /dev/null)
apt-get install -y xvfb
export DISPLAY=:99.0
Xvfb :99 -screen 0 1024x768x24 > /dev/null 2>&1 &

(credit for this fix to: https://github.com/pyvista/gl-ci-helpers)

OpenGL error

re-running the command: python -c "import polyscope as ps; ps.init()" throws the following error:

[polyscope] Backend: openGL3_glfw -- Loaded openGL version: 3.3 (Core Profile) Mesa 18.3.6
[polyscope] Polyscope OpenGL Error!  Type: Invalid enum
GLError() after shader compilation! Program text:


// tag ${ GLSL_VERSION }$
// from rule: GLSL_VERSION
#version 330 core

      in vec3 a_position;
      out vec2 tCoord;

      void main()
      {
          tCoord = (a_position.xy+vec2(1.0,1.0))/2.0;
          gl_Position = vec4(a_position,1.);
      }

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
    psb.init(backend)
RuntimeError: OpenGl error occurred. Text: Invalid enum
[1] + Done(1)                    Xvfb :99 -screen 0 1024x768x24 1>/dev/null 2>&1

At this point, I've not found a fix yet.

Guida per i contributori

Nessuna guida per i contributori indicizzata per questo repository

Come iniziare

  1. Leggi tutta la issue e poi la guida ai contributi del progetto.
  2. Commenta sulla issue per dire che te ne occupi tu — evita che due persone facciano lo stesso lavoro.
  3. Fai un fork del repository e lavora su un branch.
  4. Apri una pull request che faccia riferimento al numero della issue.

Direzione di ricerca

Riprodurre il fallimento segnalato di python -c "import polyscope as ps; ps.init()" nell’ambiente Ubuntu/Xvfb, quindi leggere il percorso di inizializzazione mostrato in polyscope/core.py e confrontarlo con issue #82. Il lavoro è completato quando ps.init() ha esito positivo nella configurazione headless in stile CI senza gli errori GLFW o OpenGL.

Scritto dal modello di indicizzazione a partire dal testo della issue.

Valutazione

Stack tecnologico
docker, python, ubuntu
Ambito
devops, testing
Tipo di issue
Bug
Difficoltà
4/5
Tempo stimato
3-5 giorni
Stato di attività
Ferma
Chiarezza
Da chiarire
Idoneità per principianti
35/100

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