Running polyscope on remote servers [python]
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I am trying to run the python polyscope library in a headless environment (running some tests in CI); but that has presented some challenges. This issue is the same underlying cause as #82 .
Environment
- docker container
- OS: ubuntu
- Python 3.8.6
- Polyscope: 0.1.6
polyscope installed with: python -m pip install polyscope
Partial fixes
I worked through a couple of issues but couldn't get everything working (yet):
apt-get install -y libglfw3-dev
apt-get install -y xvfb
export DISPLAY=:99.0
Xvfb :99 -screen 0 1024x768x24 > /dev/null 2>&1 &
There error I get when running python -c "import polyscope as ps; ps.init() is the following:
[polyscope] Backend: openGL3_glfw -- Loaded openGL version: 3.3 (Core Profile) Mesa 18.3.6
[polyscope] Polyscope OpenGL Error! Type: Invalid enum
GLError() after shader compilation! Program text:
// tag ${ GLSL_VERSION }$
// from rule: GLSL_VERSION
#version 330 core
in vec3 a_position;
out vec2 tCoord;
void main()
{
tCoord = (a_position.xy+vec2(1.0,1.0))/2.0;
gl_Position = vec4(a_position,1.);
}
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
psb.init(backend)
RuntimeError: OpenGl error occurred. Text: Invalid enum
[1] + Done(1) Xvfb :99 -screen 0 1024x768x24 1>/dev/null 2>&1
I've put the debugging process I've been through so far and would appreciate any tips on where to go next.
Thanks for an already fantastic project! Keep up the great work 😀
Missing glfw
The first error you might encounter when running polyscope in a headless environment is a missing glfw the error looks like issue #82:
running the command: python -c "import polyscope as ps; ps.init() throws the following error:
backend = ''
def init(backend=""):
"""Initialize Polyscope"""
cwd_before = os.getcwd() # see note below
> psb.init(backend)
E RuntimeError: [polyscope] ERROR: Failed to initialize glfw
/opt/conda/envs/test/lib/python3.8/site-packages/polyscope/core.py:12: RuntimeError
Fix on ubuntu
The fix to that is to install glfw
sudo apt-get install libglfw3
Missing display
re-running the command: python -c "import polyscope as ps; ps.init()" throws the following error:
GLFW emitted error: X11: The DISPLAY environment variable is missing
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
psb.init(backend)
RuntimeError: [polyscope] ERROR: Failed to initialize glfw
v
Adding a display (to /dev/null)
apt-get install -y xvfb
export DISPLAY=:99.0
Xvfb :99 -screen 0 1024x768x24 > /dev/null 2>&1 &
(credit for this fix to: https://github.com/pyvista/gl-ci-helpers)
OpenGL error
re-running the command: python -c "import polyscope as ps; ps.init()" throws the following error:
[polyscope] Backend: openGL3_glfw -- Loaded openGL version: 3.3 (Core Profile) Mesa 18.3.6
[polyscope] Polyscope OpenGL Error! Type: Invalid enum
GLError() after shader compilation! Program text:
// tag ${ GLSL_VERSION }$
// from rule: GLSL_VERSION
#version 330 core
in vec3 a_position;
out vec2 tCoord;
void main()
{
tCoord = (a_position.xy+vec2(1.0,1.0))/2.0;
gl_Position = vec4(a_position,1.);
}
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
psb.init(backend)
RuntimeError: OpenGl error occurred. Text: Invalid enum
[1] + Done(1) Xvfb :99 -screen 0 1024x768x24 1>/dev/null 2>&1
At this point, I've not found a fix yet.
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Rechercherichtung
Reproduziere den gemeldeten Fehler bei python -c "import polyscope as ps; ps.init()" in der Ubuntu/Xvfb-Umgebung, lies dann den in polyscope/core.py gezeigten Initialisierungspfad und vergleiche ihn mit issue #82. Erledigt ist die Aufgabe, wenn ps.init() im headless CI-ähnlichen Setup ohne die GLFW- oder OpenGL-Fehler erfolgreich ist.
Vom Indexierungsmodell aus dem Issue-Text verfasst.
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- docker, python, ubuntu
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