Running polyscope on remote servers [python]
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Description
context
I am trying to run the python polyscope library in a headless environment (running some tests in CI); but that has presented some challenges. This issue is the same underlying cause as #82 .
Environment
- docker container
- OS: ubuntu
- Python 3.8.6
- Polyscope: 0.1.6
polyscope installed with: python -m pip install polyscope
Partial fixes
I worked through a couple of issues but couldn't get everything working (yet):
apt-get install -y libglfw3-dev
apt-get install -y xvfb
export DISPLAY=:99.0
Xvfb :99 -screen 0 1024x768x24 > /dev/null 2>&1 &
There error I get when running python -c "import polyscope as ps; ps.init() is the following:
[polyscope] Backend: openGL3_glfw -- Loaded openGL version: 3.3 (Core Profile) Mesa 18.3.6
[polyscope] Polyscope OpenGL Error! Type: Invalid enum
GLError() after shader compilation! Program text:
// tag ${ GLSL_VERSION }$
// from rule: GLSL_VERSION
#version 330 core
in vec3 a_position;
out vec2 tCoord;
void main()
{
tCoord = (a_position.xy+vec2(1.0,1.0))/2.0;
gl_Position = vec4(a_position,1.);
}
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
psb.init(backend)
RuntimeError: OpenGl error occurred. Text: Invalid enum
[1] + Done(1) Xvfb :99 -screen 0 1024x768x24 1>/dev/null 2>&1
I've put the debugging process I've been through so far and would appreciate any tips on where to go next.
Thanks for an already fantastic project! Keep up the great work 😀
Missing glfw
The first error you might encounter when running polyscope in a headless environment is a missing glfw the error looks like issue #82:
running the command: python -c "import polyscope as ps; ps.init() throws the following error:
backend = ''
def init(backend=""):
"""Initialize Polyscope"""
cwd_before = os.getcwd() # see note below
> psb.init(backend)
E RuntimeError: [polyscope] ERROR: Failed to initialize glfw
/opt/conda/envs/test/lib/python3.8/site-packages/polyscope/core.py:12: RuntimeError
Fix on ubuntu
The fix to that is to install glfw
sudo apt-get install libglfw3
Missing display
re-running the command: python -c "import polyscope as ps; ps.init()" throws the following error:
GLFW emitted error: X11: The DISPLAY environment variable is missing
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
psb.init(backend)
RuntimeError: [polyscope] ERROR: Failed to initialize glfw
v
Adding a display (to /dev/null)
apt-get install -y xvfb
export DISPLAY=:99.0
Xvfb :99 -screen 0 1024x768x24 > /dev/null 2>&1 &
(credit for this fix to: https://github.com/pyvista/gl-ci-helpers)
OpenGL error
re-running the command: python -c "import polyscope as ps; ps.init()" throws the following error:
[polyscope] Backend: openGL3_glfw -- Loaded openGL version: 3.3 (Core Profile) Mesa 18.3.6
[polyscope] Polyscope OpenGL Error! Type: Invalid enum
GLError() after shader compilation! Program text:
// tag ${ GLSL_VERSION }$
// from rule: GLSL_VERSION
#version 330 core
in vec3 a_position;
out vec2 tCoord;
void main()
{
tCoord = (a_position.xy+vec2(1.0,1.0))/2.0;
gl_Position = vec4(a_position,1.);
}
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/opt/conda/lib/python3.8/site-packages/polyscope/core.py", line 12, in init
psb.init(backend)
RuntimeError: OpenGl error occurred. Text: Invalid enum
[1] + Done(1) Xvfb :99 -screen 0 1024x768x24 1>/dev/null 2>&1
At this point, I've not found a fix yet.
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Reproduce the reported python -c "import polyscope as ps; ps.init()" failure in the Ubuntu/Xvfb environment, then read the initialization path shown in polyscope/core.py and compare it with issue #82. Done means ps.init() succeeds in the headless CI-style setup without the GLFW or OpenGL errors.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- docker, python, ubuntu
- Domain
- devops, testing
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100