nanoporetech/minknow_api

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Protobuf and gRPC specifications for the MinKNOW API

Stars: 73
Forks: 16
Open beginner issues: 0
Indexed issues: 45

Dominant language: Python
License: No license data
Last GitHub push: Jul 22, 2026
Latest indexed: Sep 20, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed
PR merge metrics: No merged PRs in 30d

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45 open issues indexed

minknowd persistently binds to port 8000 on boot, causing port collisions with standard web development servers Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

nanoporetech/minknow_api#95 · Opened Sep 17, 2026
MinKNOW 26.01.15: No basecall models are available. Possible Mooneye API problems. Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

nanoporetech/minknow_api#94 · 2 comments · Opened Aug 1, 2026
MinKNOW 26.01.15: /var/lib/minknow/data/rpc-certs/mooneye not created during install - permission denied Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

nanoporetech/minknow_api#93 · 19 comments · Opened Jun 9, 2026
Error: Ensure each CTC is inserted correctly before running check again Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

nanoporetech/minknow_api#92 · 1 comment · Opened May 26, 2026
Detecting Run Failures and Machine Crashes in MinKNOW Open

Difficulty 5/5 Over a week Newbie friendliness 35/100

nanoporetech/minknow_api#91 · 1 comment · Opened May 7, 2026
Readuntil data reception issue Open

Difficulty 4/5 3-5 days Newbie friendliness 42/100

nanoporetech/minknow_api#90 · 3 comments · Opened Mar 23, 2026
MinKNOW app issue - RPC handling error notification Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

nanoporetech/minknow_api#89 · 1 comment · Opened Mar 20, 2026
Support for over 5 channels on one computer Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

nanoporetech/minknow_api#88 · Opened Feb 4, 2026
Cannot perform grpc connection from WSL2 Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#87 · 6 comments · Opened Dec 2, 2025
No possibility to change location for tmp & intermediate files generated by MinKnow even with changed data path Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

nanoporetech/minknow_api#86 · 10 comments · Opened Oct 27, 2025
API clients only support one server certificate at a time Open

Difficulty 4/5 3-5 days Newbie friendliness 28/100

nanoporetech/minknow_api#85 · 1 comment · Opened Oct 24, 2025
rebasecalling after a run using the api Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#84 · 3 comments · Opened Sep 11, 2025
Does NVIDIA 4500 ADA graphics card work with MinKNOW Open

Difficulty 4/5 3-5 days Newbie friendliness 15/100

nanoporetech/minknow_api#83 · 1 comment · Opened Sep 3, 2025
BIG BUG: filehandle leak on latest version of MinKnow, "script error" on sequencing, terminates after 18hrs Open

Difficulty 4/5 3-5 days Newbie friendliness 28/100

nanoporetech/minknow_api#80 · 5 comments · Opened Aug 11, 2025
Does NVIDIA 50 series graphics card support it Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

nanoporetech/minknow_api#78 · 2 comments · Opened Jun 27, 2025
Wrong generation of certificates Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

nanoporetech/minknow_api#77 · 5 comments · 1 reaction · Opened Jun 4, 2025
start_protocol.py Error with --barcoding option Open

Difficulty 3/5 1-2 days Newbie friendliness 38/100

nanoporetech/minknow_api#72 · 1 comment · Opened Apr 8, 2025
minknow GUI not starting ubuntu 24 Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#70 · 2 comments · Opened Nov 21, 2024
Plan for Renaming Guppy in Manager? Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

nanoporetech/minknow_api#69 · Opened Nov 1, 2024
Live monitoring of the minknow using the API Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#68 · 11 comments · Opened Sep 20, 2024
MinKNOW run report read length estimates are way off for longer reads Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

nanoporetech/minknow_api#67 · 3 comments · 1 reaction · Opened Jun 14, 2024
MinKNOW 24.02.16 error after ~4 hours of sequencing Open

Difficulty 4/5 3-5 days Newbie friendliness 15/100

nanoporetech/minknow_api#66 · Opened Jun 5, 2024
Error with requests for which authentication is required. Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#64 · 1 comment · 1 reaction · Opened Jan 19, 2024
realtime access to channel states from the minknow API? Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

nanoporetech/minknow_api#63 · 1 comment · Opened Jan 3, 2024
Protocols "make_protocol_arguments" throws exception if no additional args are provided Open

Difficulty 2/5 1-3 hours Newbie friendliness 48/100

nanoporetech/minknow_api#62 · 1 comment · Opened Dec 20, 2023
minknow_api.examples.manage_simulated_devices does not enable adding a Flongle Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

nanoporetech/minknow_api#61 · 2 comments · Opened Nov 23, 2023
BUG: minKNOW non-default data output location broken in LINUX Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#60 · 40 comments · Opened Oct 25, 2023
I cannot run minknow on several laptops Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

nanoporetech/minknow_api#58 · 1 comment · Opened Sep 11, 2023
Custom output folder as part of extra_args in start_protocol Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

nanoporetech/minknow_api#54 · 1 comment · Opened Jun 2, 2023
More examples, phisical device simulator Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

nanoporetech/minknow_api#50 · 5 comments · Opened Feb 20, 2023
Set minimum chunk size for adaptive sequencing Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

nanoporetech/minknow_api#49 · Opened Feb 17, 2023
Query pore activity Open

Difficulty 5/5 Over a week Newbie friendliness 28/100

nanoporetech/minknow_api#47 · 2 comments · Opened Jan 21, 2023
How to use the extra args? Open

Difficulty 2/5 1-3 hours Newbie friendliness 35/100

nanoporetech/minknow_api#46 · 4 comments · 1 reaction · Opened Jan 5, 2023
Is there a list of args for the start protocol method within the protocol.proto? Open

Difficulty 2/5 1-3 hours Newbie friendliness 25/100

nanoporetech/minknow_api#43 · 2 comments · Opened Sep 20, 2022
Question Regarding Development with Simulation Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#42 · 19 comments · 1 reaction · Opened Sep 2, 2022
remotely monitor the status of minknow protocol and run a custom script Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

nanoporetech/minknow_api#41 · 5 comments · Opened Jul 30, 2022
minknow_api RPC error Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

nanoporetech/minknow_api#39 · 3 comments · Opened May 27, 2022
Bad metadata key - Error 16 on Instance Service Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

nanoporetech/minknow_api#38 · 13 comments · Opened May 19, 2022
restart position without the MiKNOW UI Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

nanoporetech/minknow_api#35 · 5 comments · Opened Feb 24, 2022
Question regarding stopped unblock calls Open

Difficulty 4/5 3-5 days Newbie friendliness 18/100

nanoporetech/minknow_api#27 · 2 comments · Opened Jul 2, 2021
Distinguish "Mux_Scan" and "Sequencing" state Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

nanoporetech/minknow_api#22 · 2 comments · 2 reactions · Opened May 14, 2021
setting break_reads_after_seconds parameter Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

nanoporetech/minknow_api#18 · 2 comments · Opened Apr 21, 2021
Pausing a run? Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

nanoporetech/minknow_api#15 · 3 comments · 2 reactions · Opened Mar 12, 2021
Minknow_api in web with javascript Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

nanoporetech/minknow_api#14 · 4 comments · 1 reaction · Opened Feb 25, 2021
How to get alignment info which is used in latest version of Minknow for visualzation of guppy real time alignment Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

nanoporetech/minknow_api#10 · 4 comments · Opened Aug 26, 2020

nanoporetech/minknow_api

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