nanoporetech / nanoporetech/minknow_api
remotely monitor the status of minknow protocol and run a custom script
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- Dominant language
- Python
- Stars
- 73
- Forks
- 16
- PR merge metrics
- No merged PRs in 30d
Description
Hi,
Thank you developing the those useful APIs for Miniknow. I have computer A connected with Minknow and a computer B used to process the data. I am interested in monitoring the sequencing status on computer B and run a custom script located in computer A to cleaned the data and transfer the data to computer B once the sequencing is completed. Then the data will be processed automatically on computer B with a pipeline. I was wondering which APIs I should use to implement the whole process?
Best,
ZL
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First steps
- Read the whole issue, then the project's contributing guide.
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Research direction
No repository file, test, or entry point is named. Start by identifying the MinKNOW API used to monitor sequencing status and the supported way to trigger a script and transfer data between the two computers. Done would require a documented, working workflow covering status monitoring, script execution, transfer, and pipeline handoff.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- grpc, python
- Domain
- api
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100