PEtab-dev / PEtab-dev/libpetab-python
Visualization: if column 'XValues' not provided and multiple conditions should be plotted automatically
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visualization
- 主要语言
- Python
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- 18
- 派生
- 9
- PR 合并指标
- 30 天内没有已合并 PR
描述
If in the visualization table, the column XValues is not provided, it is inferred:
- if in measurement file measurement time is not constant, then XValues = 'time' ->plot time course
- if its constant, then dose response plots are plotted. For now, only the first column in the condition file is taken into account.
Expand to automatically plot all conditions. Ideally like subplots B and C in:
https://journals.plos.org/ploscompbiol/article/file?type=supplementary&id=info:doi/10.1371/journal.pcbi.1007147.s005
see conversation in PEtab-dev/PEtab#283.
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调研方向
Start with the visualization-table handling for the XValues column, then review how measurement time and the first condition-file column currently select plots. Use the PEtab-dev/PEtab#283 conversation and the linked supplementary example as context. Done means automatically plotting all conditions, including multiple dose-response subplots when XValues is absent.
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评估
- 技术栈
- python
- 领域
- data-visualization
- Issue 类型
- 功能
- 难度
- 4/5
- 预计耗时
- 3-5 天
- 活跃度
- 停滞
- 描述清晰度
- 基本清楚
- 新手友好度
- 45/100