AllenNeuralDynamics / AllenNeuralDynamics/Aind.Behavior.DynamicForaging

Bias computation does not match v1 bias computation

未關閉
#134 0 則留言 0 個 reaction 已指派 1 人 已被 @micahwoodard 認領 在 GitHub 檢視
主要語言
C#
星號
0
分支
0
平均合併
1 天 22 小時
30 天內合併 PR
21

描述

The bias computation is deterministic, so it should match exactly, but it does not. Its very close, and is likely simply a difference in parameters, but its worth understanding why its not exact in case there is a deeper misunderstanding

In the following plot, I'm plotting the bias computed by the refactor acquisition code, as well as bias computed post-hoc by our analysis tools. The analysis tool computation matches exactly with how the v1 implementation acquisition code computed bias.

- Note the v1 version computes the bias every 10 trials and then backfills. So what we are looking for is the right-side of each v1 value to match the refactor bias, but it does not match.
- key parameters:
- n_trials_back = 5
- max_window = 200
- cv = 1
- compute_every = 10 # this is 1 for the refactor, and that should be fine

Image

貢獻指南

這個儲存庫沒有索引到貢獻指南

評估

這個 Issue 還沒有評估資料。

把新 issue 寄到你的電子郵件信箱

精選適合新手參與的 GitHub issue 摘要。