AllenCell / AllenCell/camera-alignment-core
Generated OME-TIFFs must be saved with relevant embedded microscopy metadata
- Linguagem predominante
- Python
- Estrelas
- 0
- Forks
- 1
- Métricas de merge de PRs
- Nenhum PR com merge em 30d
Descrição
## Description
Alignment output is saved as an OME-TIFF, but there is no effort to ensure that the embedded metadata contained within the source microscopy imagery is copied into the OME-TIFF.
This needs to be audited and fixed.
- Generation of aligned optical control image: https://github.com/aics-int/camera-alignment-core/blob/main/camera_alignment_core/align.py#L160-L165
- Generate of aligned scenes from image: https://github.com/aics-int/camera-alignment-core/blob/main/camera_alignment_core/align.py#L260-L265
## Expected Behavior
*What did you expect to happen instead?*
All? Some? Most? embedded metadata from source image needs to be saved within the aligned output. Doubtful anyone can provide a complete list of what needs to be present, but, this needs to be best-effort.
Guia de contribuição
Nenhum guia de contribuição indexado para este repositório
Avaliação
Esta issue ainda não foi avaliada.