scverse/spatialdata-tutorials

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8 open issues indexed

speed_up_illustration.ipynb notebook plots all the intermediate plots Open

Difficulty 2/5 1-3 hours Newbie friendliness 45/100

scverse/spatialdata-tutorials#150 · 1 comment · Opened Aug 15, 2025
Confusion of labels and images in labels_shapes_interchangeability.ipynb Open

Difficulty 2/5 1-3 hours Newbie friendliness 55/100

scverse/spatialdata-tutorials#146 · 1 reaction · Opened Jul 13, 2025
Intro notebook not in docs Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

scverse/spatialdata-tutorials#137 · Opened Mar 15, 2025
Update Xenium dataset Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

scverse/spatialdata-tutorials#110 · Opened Jul 31, 2024
Check reproducibility of Steinbock and NanoString notebooks on Windows Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

scverse/spatialdata-tutorials#106 · Opened Jul 16, 2024
Replace `os.path` with `Path` and "unzip" with `shutil.unpack_archive` Open

Difficulty 2/5 1-3 hours Newbie friendliness 30/100

scverse/spatialdata-tutorials#40 · 1 comment · Opened Jun 28, 2023
Refactor Xenium + Visium paths and use better names Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

scverse/spatialdata-tutorials#39 · 1 comment · Opened Jun 27, 2023
Notebook on 3D data and on images from multiple imaging cycles Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

scverse/spatialdata-tutorials#23 · 2 comments · Opened May 17, 2023

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