scverse / scverse/spatialdata-tutorials

speed_up_illustration.ipynb notebook plots all the intermediate plots

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Jupyter Notebook
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Description

@Sonja-Stockhaus @timtreis I have tried running the speed_up_illustration.ipynb notebook and I have noticed that the all the plots that are made to compute the benchmark are shown. I believe in a previous versions they were hidden. See screenshot.

Image

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Research direction

Open speed_up_illustration.ipynb and run the notebook to identify the intermediate plots produced while computing the benchmark. Compare the output with the reported screenshot and the earlier behavior described in the issue; done means those intermediate plots are no longer displayed while the benchmark result remains available.

Written by the indexing model from the issue text.

Assessment

Tech stack
jupyter-notebook
Domain
data-visualization
Issue type
Bug
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
45/100

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