venv on Windows 11 with Python 3.13.7 includes global paths in sys.path despite include-system-site-packages = false, causing packages to be installed globally instead of in the venv

Bug report

Bug description:

Description

When creating and activating a virtual environment with Python 3.13.7 on Windows 11, sys.path includes global Python paths (e.g., C:\Program Files\Python313\python313.zip, C:\Program Files\Python313\DLLs, etc.), even though pyvenv.cfg has include-system-site-packages = false. This causes python -m pip install <package> to install packages to the global site-packages (C:\Program Files\Python313\Lib\site-packages) instead of the virtual environment's site-packages.

This breaks virtual environment isolation, requiring --target for every install, which is not the expected behavior.

Steps to Reproduce

1. Install Python 3.13.7 from the official Windows installer, ensuring "Add python.exe to PATH" is checked.

2. Open PowerShell 7.5.2.

3. Create a test directory and virtual environment:
   mkdir test_venv_bug
   cd test_venv_bug
   python -m venv .venv

4. Activate the virtual environment:
   ..venv\Scripts\Activate.ps1

5. Check sys.path:
   python -c "import sys; print('\n'.join(sys.path))"

Expected: Only venv paths (e.g., C:\path\to\test_venv_bug\.venv, C:\path\to\test_venv_bug\.venv\Lib\site-packages).

6. Check pyvenv.cfg (should have include-system-site-packages = false):
   Get-Content .venv\pyvenv.cfg

7. Install a test package:
   python -m pip install requests

8. Verify installation location:
   python -m pip list
   Get-ChildItem -Path .venv\Lib\site-packages | findstr requests
   Get-ChildItem -Path 'C:\Program Files\Python313\Lib\site-packages' | findstr requests

Expected: requests in .venv\Lib\site-packages; nothing in global.

Expected Behavior

• sys.path should only include virtual environment paths (no global C:\Program Files\Python313* paths).
• python -m pip install should install to .venv\Lib\site-packages.

Actual Behavior

• sys.path includes global paths:
  • C:\Program Files\Python313\python313.zip
  • C:\Program Files\Python313\DLLs
  • C:\Program Files\Python313\Lib
  • C:\Program Files\Python313
  • C:\Users\jdstr\Documents\GitHub\ndx_scalper.git.venv_ndx_scalper
  • C:\Users\jdstr\Documents\GitHub\ndx_scalper.git.venv_ndx_scalper\Lib\site-packages
• python -m pip install requests installs to global site-packages (C:\Program Files\Python313\Lib\site-packages), with warnings like "Target directory C:\Program Files\Python313\Lib\site-packages\certifi already exists."
• python -m pip list in venv shows only pip; packages are missing in venv.

Environment

• Python version: 3.13.7 (installed via official Windows installer)
• OS: Windows 11 24H2 (Build 26100.5074)
• Shell: PowerShell 7.5.2
• pyvenv.cfg contents:

home = C:\Program Files\Python313
include-system-site-packages = false
version = 3.13.7
executable = C:\Program Files\Python313\python.exe
command = C:\Program Files\Python313\python.exe -m venv C:\Users\jdstr\Documents\GitHub\ndx_scalper.git.venv_ndx_scalper

• Activated venv prompt: (.venv) PS ...
• Get-Command python and Get-Command pip point to venv Scripts\python.exe and Scripts\pip.exe.

Additional Notes

• Using --target=.venv\Lib\site-packages works as a workaround, but it's cumbersome.
• Searched GitHub issues and Stack Overflow—no exact match, but similar to older Windows venv path leaks (e.g., pip #11154).
• No antivirus or custom configs interfering (standard setup).

Minimal Reproducible Example

See "Steps to Reproduce" above. The test directory can be zipped and attached if needed.

Thanks for looking into this—it's breaking venv isolation on Windows.

CPython versions tested on:

3.13

Operating systems tested on:

Windows

首先，使用 python -m venv、已啟用的 Scripts\python.exe 以及所列的 Python 3.13.7 Windows 環境重現該報告。比較 sys.path、pyvenv.cfg 以及 python -m pip 回報的目標位置；當 include-system-site-packages = false 時排除系統路徑，且安裝內容仍保留在 venv 中，即表示完成。