geom_GeomSignif() has yet to be implemented in plotly
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Description
Hi. I am using ggplot to draw bar functions. Tried to convert the ggplot to a plotly graph using ggplotly and got the message to open an issue since the geom_Geomsignif() has yet to be implemented in plotly.
here my code.
library(ggplot)
library(ggsignif)
library(plotly)
p <- ggplot()+geom_bar(data=plot_data1,mapping=aes(x=group,y=mean),fill="white",size=1.5,colour=c("#1E90FF","gold","red"),position=position_dodge(),stat="identity",width=0.6)+geom_jitter(data=plot_data2,mapping=aes(x=group,y=Retive_Abundance,fill=group,colour=group,shape=group),size=2,height=0.05,width=0.1)+scale_colour_manual(values=c("#1E90FF","gold","red"))+geom_signif(data=plot_data2,mapping=aes(x=group,y=Retive_Abundance),comparisons=list(c("N","P"),c("N","T"),c("P","T")),map_signif_level=F,tip_length=c(0,0,0,0,0,0),y_position=c(38,43,40.5),size=1,textsize = 3,test = "t.test")+geom_errorbar(data=plot_data1,mapping=aes(x = group,ymin = mean-sd,ymax=mean+sd),width=0.3,colour=c("#1E90FF","gold","red"),size=0.8)+scale_y_continuous(limits =c(0, 48) ,expand = c(0,0))+theme_classic(base_line_size = 1)+labs(title="White blood cell(WBC)",x="",y="Retive_Abundance")+theme(plot.title=element_text(size = 15,colour="black",hjust = 0.5),axis.title.y = element_text(size=15,colour="black",face="bold",vjust = .5,hjust=0.5,angle=90),legend.title=element_text(size=15,colour="black",face="bold"),legend.text=element_text(size=10,colour="black",face="bold"),axis.text=element_text(size=13,colour="black",face="bold",vjust = 0.5,hjust=0.5,angle=0))
ggplotly(p)
Warning message:
In geom2trace.default(dots[[1L]][[1L]], dots[[2L]][[1L]], dots[[3L]][[1L]]) :
geom_GeomSignif() has yet to be implemented in plotly.
If you'd like to see this geom implemented,
Please open an issue with your example code at
https://github.com/ropensci/plotly/issues
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start at the geom2trace.default entry point named in the warning and reproduce the issue with the supplied ggplot, ggsignif, and plotly example. The work is done when ggplotly handles geom_signif without the warning and renders the significance annotations in the resulting graph.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- plotly, r
- Domain
- data-visualization
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100