pharmaverse/tern

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Table, Listings, and Graphs (TLG) library for common outputs used in clinical trials

Stars: 106
Forks: 34
Open beginner issues: 0
Indexed issues: 55
Avg merge: 8d 9h
Merged PRs (30d): 6

Dominant language: R
License: No license data
Last GitHub push: Sep 18, 2026
Latest indexed: Sep 19, 2026
Contributing guide: Contributing guide
Code of conduct: Code of conduct
Beginner labels: No beginner labels indexed

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55 open issues indexed

Follow-up minor improvements for `h_prepare_2x2_table()` Open

priority refactor

pharmaverse/tern#1530 · 1 assignee · Opened Sep 19, 2026
Add complete `{tern}` workflow to Mantel-Fleiss vignette Open

documentation

Difficulty 3/5 1-2 days Newbie friendliness 72/100

pharmaverse/tern#1528 · Opened Sep 15, 2026
URGENT! Failed CRAN Checks: 2026-09-13 Open

pharmaverse/tern#1527 · 3 assignees · Opened Sep 13, 2026
Unify the input interface of `h_prop_diff` and `h_prop_diff_test` Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 52/100

pharmaverse/tern#1520 · Opened Sep 8, 2026
[Bug]: `prop_diff_cmh()` treats missing strata as a valid stratum Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 50/100

pharmaverse/tern#1517 · 6 comments · Opened Sep 2, 2026
Refactor 2x2 table handling to use `h_prepare_2x2_table()` Open

refactor

Difficulty 4/5 3-5 days Newbie friendliness 48/100

pharmaverse/tern#1516 · Opened Sep 2, 2026
Update CLA configuration and URLs after migration to pharmaverse Open

pharmaverse/tern#1505 · 1 assignee · Opened Aug 8, 2026
[Feature Request]: Support left-aligned forest plot placement in `g_forest()` Open

enhancement

pharmaverse/tern#1502 · 1 assignee · Opened Jul 21, 2026
[Bug]: revdep checks Status: ? (Failed to check) Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 48/100

pharmaverse/tern#1472 · 7 comments · Opened Mar 27, 2026
[Bug]: summarize_ancova fails to return contrast rows when ref_group contains regex metacharacters such as `+` Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 55/100

pharmaverse/tern#1471 · 2 comments · Opened Mar 17, 2026
[Bug]: analyze_vars_in_cols fails when combining mean_ci with max Open

bug

Difficulty 3/5 1-2 days Newbie friendliness 42/100

pharmaverse/tern#1468 · 1 comment · Opened Feb 11, 2026
[Feature Request]: Ability to turn off built-in formatting in tern afuns Open

collaboration enhancement

pharmaverse/tern#1439 · 2 assignees · Opened Oct 9, 2025
[Bug]: n_blq in summary tables Open

bug sme

Difficulty 3/5 1-2 days Newbie friendliness 42/100

pharmaverse/tern#1435 · Opened Aug 27, 2025
[Bug]: Differentiation for MRTIV into bolus (MRTIB) & continuous infusion (MRTIC) Open

bug

Difficulty 2/5 1-3 hours Newbie friendliness 45/100

pharmaverse/tern#1429 · Opened Jul 21, 2025
[Bug]: g_km: x-axis alignment for plot and table Open

bug sme

Difficulty 3/5 1-2 days Newbie friendliness 45/100

pharmaverse/tern#1428 · 1 comment · Opened Jul 18, 2025
[Bug]: Stratified Wilson and Newcombe CI's when zero successes are observed Open

bug

Difficulty 4/5 3-5 days Newbie friendliness 32/100

pharmaverse/tern#1416 · 3 comments · Opened May 8, 2025
[Feature Request]: add Odds ratio 95% CI and Relative Risks 95% CI Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 30/100

pharmaverse/tern#1415 · 2 comments · 1 reaction · Opened Apr 14, 2025
Possible bug in rare format cases Open

bug sme

Difficulty 3/5 1-2 days Newbie friendliness 35/100

pharmaverse/tern#1409 · Opened Mar 11, 2025
Refactor risk diff related functions (in particular `tabulate_rsp_subgroups`) Open

enhancement sme

Difficulty 5/5 Over a week Newbie friendliness 30/100

pharmaverse/tern#1391 · Opened Feb 18, 2025
Consider refactoring `get_stat_names()` Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 30/100

pharmaverse/tern#1380 · 1 reaction · Opened Jan 28, 2025
Harmonize NAs handling Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 25/100

pharmaverse/tern#1377 · Opened Jan 21, 2025
pval handling to be refactored Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

pharmaverse/tern#1371 · 1 reaction · Opened Jan 16, 2025
add statistic names to all statistic functions (minor refactoring!!) Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 45/100

pharmaverse/tern#1362 · Opened Dec 18, 2024
[Bug]: `summarize_glm_count()` rate when zero events in one group Open

bug sme

Difficulty 4/5 3-5 days Newbie friendliness 25/100

pharmaverse/tern#1360 · 4 comments · Opened Dec 10, 2024
[Feature Request]: request lsmeans se and CI for summary_ancova Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1359 · 1 comment · Opened Dec 10, 2024
[Feature Request]: g_ipp additional grouping/faceting options Open

enhancement

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1337 · 3 comments · 1 reaction · Opened Oct 23, 2024
Vignette enhancements Open

documentation enhancement sme

Difficulty 3/5 1-2 days Newbie friendliness 45/100

pharmaverse/tern#1336 · 1 comment · 1 reaction · Opened Oct 22, 2024
[Feature Request]: varying decimal precision in a_summary Open

enhancement

pharmaverse/tern#1324 · 1 comment · 1 assignee · Opened Oct 14, 2024
[Feature Request]: add new statistics Open

collaboration enhancement sme

pharmaverse/tern#1307 · 1 assignee · Opened Sep 10, 2024
[Question]: More information needed about how univariate summarize_coxph() inputs are passed to survival::coxph() Open

question

Difficulty 3/5 1-2 days Newbie friendliness 35/100

pharmaverse/tern#1267 · 10 comments · Opened Jul 12, 2024
Color by group in individual_patient_plot Open

enhancement sme

Difficulty 3/5 1-2 days Newbie friendliness 45/100

pharmaverse/tern#1223 · Opened Apr 10, 2024
[Bug]: Imputation rule 50 % does not work Open

blocked bug sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1208 · 3 comments · Opened Mar 12, 2024
Refactor `tabulate_rsp_biomarkers` and source tabulation function `h_tab_one_biomarker` to avoid degenerative structure Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1195 · 1 comment · Opened Feb 22, 2024
Remove `rbind` nesting from {tern} - e.g. `tabulate_survival_subgroups` Open

enhancement refactor sme

Difficulty 3/5 1-2 days Newbie friendliness 35/100

pharmaverse/tern#1181 · 2 comments · Opened Jan 24, 2024
Don't hide warnings Open

Difficulty 3/5 1-2 days Newbie friendliness 42/100

pharmaverse/tern#1176 · Opened Jan 18, 2024
[Bug]: computation of survival follow up time in `g_km` Open

bug question sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1162 · 1 comment · Opened Jan 2, 2024
[Feature Request]: change default parameter in surv_timepoint Open

enhancement sme

Difficulty 1/5 Under an hour Newbie friendliness 58/100

pharmaverse/tern#1138 · Opened Nov 24, 2023
[Bug]: Documentation typo in rtables-scoring-functions section of pages Open

bug sme

Difficulty 1/5 Under an hour Newbie friendliness 55/100

pharmaverse/tern#1118 · 4 comments · Opened Nov 2, 2023
[Feature Request]: Add option to calculate count fraction denominator with row counts (without split_rows_by) Open

enhancement sme

Difficulty 5/5 Over a week Newbie friendliness 25/100

pharmaverse/tern#1112 · Opened Oct 31, 2023
[Bug]: add_rowcounts doesn't work if layout begins with non-population variable (eg AVISIT) Open

bug sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1060 · 2 comments · Opened Sep 13, 2023
[Question]: should prop_diff also have ".N_col" argument Open

question sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1055 · Opened Sep 6, 2023
Small utility function for printing well formatted data Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 20/100

pharmaverse/tern#1054 · 1 comment · 1 reaction · Opened Sep 5, 2023
Create `analyze` equivalent of `summarize_patients_events_in_cols` Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1039 · Opened Aug 22, 2023
Refactor `summarize_logistic` to pass sanitation check Open

enhancement sme

Difficulty 3/5 1-2 days Newbie friendliness 35/100

pharmaverse/tern#1037 · Opened Aug 22, 2023
[Feature Request]: Wald's z-test for 2 proportions = AME over logistic regression Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 35/100

pharmaverse/tern#1011 · Opened Jul 21, 2023
Fix leaves level for `count_occurrences` and `summarize_num_patients` Open

enhancement sme

Difficulty 5/5 Over a week Newbie friendliness 35/100

pharmaverse/tern#996 · 1 comment · Opened Jul 4, 2023
Check degenerate tables after sanitation update Open

enhancement sme

Difficulty 4/5 3-5 days Newbie friendliness 25/100

pharmaverse/tern#992 · 2 comments · Opened Jun 27, 2023
add links to documentation for `spl_function` and maybe others? custom split functions? Open

documentation enhancement sme

Difficulty 2/5 1-3 hours Newbie friendliness 25/100

pharmaverse/tern#988 · Opened Jun 26, 2023
Removing examples for unxported functions, reinstate them in tern.s Open

sme

Difficulty 2/5 1-3 hours Newbie friendliness 30/100

pharmaverse/tern#972 · Opened Jun 16, 2023
[Feature Request]: Add a new format Open

discussion enhancement low-priority sme

Difficulty 2/5 1-3 hours Newbie friendliness 45/100

pharmaverse/tern#880 · 7 comments · Opened Apr 14, 2023

pharmaverse/tern

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