neurostuff / neurostuff/autonima

Compare neurostore-text-extractor with autonima

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Dominant language
Python
Stars
4
Forks
1
Avg merge
12h 56m
Merged PRs (30d)
2

Description

Neurostore-text-extractor prompt: https://github.com/neurostuff/ns-pond-ingestion-workflow/blob/main/ingestion_workflow/services/create_analyses.py

autonima prompt: https://github.com/neurostuff/autonima/blob/master/autonima/coordinates/parser.py

based on the projects in autonima-results compare the outputs of the two prompts to see which is more accurate

outcome measures:

  • overlap with manually extracted coordinates
  • number of matching analyses.

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with ingestion_workflow/services/create_analyses.py and autonima/coordinates/parser.py to understand the two prompts. Run both against the projects in autonima-results, then compare each output with manually extracted coordinates and count matching analyses. Done means reporting which extractor is more accurate using those two outcome measures.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Quiet
Clarity
Mostly clear
Newbie friendliness
55/100

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