Owner

intermine

60 indexed repositories · View on GitHub

intermine
A powerful open source data warehouse system

Java · 271 stars
bluegenes
A friendly next-generation interface for Genomic data discovery powered by InterMine

Clojure · 75 stars
InterMineR
R package for InterMine

R · 18 stars
intermine-ws-python-docs
Tutorials for the InterMine Python web client

Jupyter Notebook · 14 stars
internships
InterMine GSoC informational mini-site for gsoc mentors and students

HTML · 12 stars
im-tables
Dynamic Result Table Library

CoffeeScript · 10 stars
imjs
InterMine Generic WebService Client Library

JavaScript · 8 stars
intermine-ws-python
InterMine Client library in Python

Python · 8 stars
intermine-registry
Registry to store and browse all known instances of InterMine. Developed during GSoC 2017 by Leonardo Kuffo

JavaScript · 7 stars
neo4j
Project to develop Neo4j as the backing store for InterMine

Java · 6 stars
im-docs
Documentation for the InterMine project

JavaScript · 6 stars
outreach
Repo for ideas and community discussions about InterMine-related outreach and communities

5 stars
intermine-homepage-2017
InterMine's new homepage as of 2017

HTML · 5 stars
biotestmine
An example InterMine - for demoing and testing

Shell · 5 stars
generator-bluegenes-tool
Scaffold generator for BlueGenes tools

JavaScript · 5 stars
docker-intermine-gradle
Docker for InterMine

Shell · 5 stars
similarity
similarity

Python · 4 stars
biovalidator
a library to validate biological data formats

Java · 4 stars
bluegenes-ux-ideas
Ideas for improvement in ux-ui

4 stars
intermine_compose
Repo to handle docker orchestration in the cloud

Python · 4 stars
40 more repositories live on View on GitHub

Open All

handle CSS callbacks properly cross browser Open

intermine/intermine-api-loader#2 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
if one url times out, use another if provided Open

enhancement

intermine/intermine-api-loader#4 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
export `loader` only if we are in node context Open

enhancement

intermine/intermine-api-loader#10 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
CSS callback Open

intermine/intermine-api-loader#11 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
naming a CSS and JS library the same will not load both libraries Open

bug

intermine/intermine-api-loader#18 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
circular dependencies detected Open

bug

intermine/intermine-api-loader#19 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Let users add facets to the currently displayed set Open

intermine/facetted-query-builder#1 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Let users have their own preferred facet sets Open

intermine/facetted-query-builder#2 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
create build file if it does not exist yet Open

most def

intermine/apps-b-builder#13 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
do not create .css file if empty Open

sure

intermine/apps-b-builder#14 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
publications-displayer: root.setTimeout hits a snag Open

fix a bug

intermine/intermine-apps-a#8 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
choose-list: add < / > / ... to the paginator Open

enhancement

intermine/intermine-apps-a#11 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
choose-list: what if our selected list is in one of the filtered ones Open

question

intermine/intermine-apps-a#12 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
choose-list: need a kill switch otherwise apps still persist in memory attached to events etc Open

fix a bug

intermine/intermine-apps-a#13 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
versioning of apps and us be able to pick a version npm style Open

enhancement

intermine/intermine-apps-a#18 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
choose-list: order tags inline in a row Open

enhancement

intermine/intermine-apps-a#19 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
choose-list: if we have selected a list that needs to upgrade, wait for it to upgrade Open

enhancement

intermine/intermine-apps-a#20 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
do away with the callback Open

enhancement

intermine/apps-a-middleware#7 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
tsc file output issue Open

bug

intermine/apps-a-middleware#8 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
server side routes Open

enhancement

intermine/apps-a-middleware#10 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
it is difficult to tell what is us Open

enhancement

intermine/apps-a-middleware#12 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
check that something got exported from the config file if it exists Open

intermine/apps-a-middleware#13 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
make use of component.io for erm, components Open

enhancement

intermine/apps-a-middleware#14 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
what if a model is struck off in one window? cannot just be adding ad nauseam Open

do eventually

intermine/intermine-steps#24 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
the unique guid needs to be on the level of LocalStorage Open

do eventually

intermine/intermine-steps#25 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
track user actions in a flow like Google Analytics Open

do eventually

intermine/intermine-steps#30 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
a growl notification Open

do eventually

intermine/intermine-steps#31 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
shift all rows underneath when making a split Open

do eventually

intermine/intermine-steps#36 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
use stickit to bind tool forms with values Open

nice to have

intermine/intermine-steps#41 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
make dev, build Open

intermine/intermine-steps#62 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
slick file upload that reads the plain textfile on client and populates textarea Open

do eventually

intermine/intermine-steps#63 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
clicking on a tool in history should scroll to the element after redirect Open

do eventually

intermine/intermine-steps#64 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
if tool labels have the same weight, add them sorted alphabetically Open

do eventually

intermine/intermine-steps#65 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
be able to pass param to tool label Open

important

intermine/intermine-steps#73 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
global loading ui Open

intermine/intermine-steps#74 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Use _.uniqueId() for model ids Open

nice to have

intermine/intermine-steps#76 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
rewrite the core because the number of views created is ridiculous Open

important

intermine/intermine-steps#79 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
global warning handler through modal Open

important

intermine/intermine-steps#82 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 17, 2026
require our libs Open

do eventually

intermine/intermine-steps#85 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
add slides links Open

intermine/bosc-2018#3 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add list of python exercises Open

intermine/bosc-2018#5 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add ISA, bbcrs, welcome trust LOGOs to the slides Open

intermine/bosc-2018#6 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add running docs Open

intermine/similarity#14 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Getting Started Open

intermine/similarity#15 · 5 comments · 1 reaction · 0 assignees · Indexed Sep 17, 2026
UI can be more better Open

intermine/mineversions#1 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
CSS ans JS code Refactoring is Possible Open

intermine/mineversions#3 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Performance benchmarking Open

intermine/biovalidator#27 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
gff validator validatest the attributes columns contains key but not values Open

intermine/biovalidator#31 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Convert markdown js code block examples to Jupyter notebooks Open

good first issue hacktoberfest help wanted

intermine/imjs-docs#3 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Videos and tutorials + Webinar Open

intermine/outreach#1 · 6 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026

Showing the newest 100

This page lists what was indexed most recently. Advanced filter has the whole inventory, narrowed by language, difficulty and how long a task takes.

Open advanced filter

intermine

Showing the newest 100

Get new issues in your inbox