Owner
int-brain-lab
22 indexed repositories · View on GitHub
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ibllib
IBL core shared libraries
Python · 69 stars
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ibl-ai-agent
IBL AI Agent helps you use a coding agent such as OpenAI Codex to analyze International Brain Laboratory (IBL) data.
Python · 52 stars
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iblapps
pyqt5 dependent applications for IBL sessions
Python · 35 stars
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iblrig
Main repository for IBL rig code
Python · 25 stars
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ibl-neuropixel
Collection of tools to handle Neuropixel 1.0 and 2.0 data
Python · 20 stars
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iblenv
Unified environment and Issue tracker for all IBL
Jupyter Notebook · 19 stars
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Python · 15 stars
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iblvideo
Video analysis for the IBL dataset
Python · 8 stars
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viewephys
Neuropixel raw data viewer
Python · 5 stars
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bpod-core
A modern Python interface for Bpod Finite State Machines.
Python · 5 stars
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ibl-alignment-gui
Ephys alignment tool
Python · 3 stars
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iblscripts
Deployment scripts for ibl
Jupyter Notebook · 3 stars
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iblatlas
IBL atlas module
Python · 3 stars
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ibleatools
Tools for electrophysiology analysis
Python · 2 stars
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lfpack
LFP compression for Neuropixels recordings
Python · 1 star
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spikepack
Delta-quantization codec for sorted spike-time arrays
Python · 1 star
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Python · 1 star
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plane2brain
a tool to map coordinates from 2d imaging plane(s) into a 3d brain atlas (mouse): x/y (pixel) -> ml/ap/dv (brain)
Python · 0 stars
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ibl-photometry
A collection of methods and tools for experimental photometry data
Jupyter Notebook · 0 stars
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mpci
Multi-Photon Calcium Imaging preprocessing
Python · 0 stars
- 2 more repositories live on View on GitHub
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Difficulty 3/5 1-2 days Newbie friendliness 68/100
int-brain-lab/ibl-alignment-gui#15 · 1 comment ·
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int-brain-lab/ibleatools#123 · 1 assignee ·
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int-brain-lab/ibleatools#122 · 1 assignee ·
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int-brain-lab/ibleatools#121 · 1 assignee ·
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Difficulty 4/5 3-5 days Newbie friendliness 48/100
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int-brain-lab/app-brain-wide-bench#40 · 1 assignee ·
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int-brain-lab/app-brain-wide-bench#39 · 2 assignees ·
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Difficulty 3/5 1-2 days Newbie friendliness 70/100
int-brain-lab/mpci#21 ·
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int-brain-lab/ibllib#1142 · 1 assignee ·
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int-brain-lab/iblalyx#165 · 1 assignee ·
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int-brain-lab/iblsre#40 · 1 comment · 1 assignee ·
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iblatlas webpage Open
Difficulty 5/5 Over a week Newbie friendliness 20/100
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int-brain-lab/spikepack#1 · 1 assignee ·
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int-brain-lab/viewephys#58 · 1 assignee ·
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int-brain-lab/mpci#20 · 1 comment · 1 assignee ·
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int-brain-lab/ibleatools#98 · 1 assignee ·
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Difficulty 3/5 1-2 days Newbie friendliness 35/100
int-brain-lab/mpci#17 ·
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Difficulty 3/5 1-2 days Newbie friendliness 45/100
int-brain-lab/lfpack#13 ·
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Difficulty 3/5 1-2 days Newbie friendliness 55/100
int-brain-lab/lfpack#12 ·
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int-brain-lab/ibl-ai-agent#29 · 1 assignee ·
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int-brain-lab/iblrig#929 · 1 assignee ·
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int-brain-lab/bpod-core#90 · 1 assignee ·
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Public release Open
int-brain-lab/app-brain-wide-bench#12 · 2 assignees ·
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Difficulty 4/5 3-5 days Newbie friendliness 45/100
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int-brain-lab/iblalyx#160 · 1 comment · 2 assignees ·
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int-brain-lab/iblalyx#159 · 1 assignee ·
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int-brain-lab/ibleatools#94 · 1 assignee ·
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int-brain-lab/ibleatools#93 · 1 comment · 1 assignee ·
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int-brain-lab/ibleatools#92 · 1 assignee ·
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Difficulty 4/5 3-5 days Newbie friendliness 38/100
int-brain-lab/mpci#13 ·
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Difficulty 5/5 Over a week Newbie friendliness 20/100
int-brain-lab/mpci#10 ·
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Difficulty 4/5 3-5 days Newbie friendliness 48/100
int-brain-lab/mpci#9 ·
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Difficulty 5/5 Over a week Newbie friendliness 35/100
int-brain-lab/mpci#8 ·
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enhancement
int-brain-lab/mpci#7 · 1 assignee ·
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Documentation plan Open
Difficulty 4/5 3-5 days Newbie friendliness 48/100
int-brain-lab/viewephys#52 · 2 comments ·
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int-brain-lab/ibleatools#90 · 1 assignee ·
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Difficulty 4/5 3-5 days Newbie friendliness 48/100
int-brain-lab/viewephys#51 · 1 reaction ·
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flexIO channels Open
int-brain-lab/bpod-core#83 · 1 assignee ·
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bpod-core: QBpod Open
int-brain-lab/bpod-core#82 · 1 assignee ·
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submission system Open
int-brain-lab/app-brain-wide-bench#9 · 2 assignees ·
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int-brain-lab/app-brain-wide-bench#8 · 2 assignees ·
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int-brain-lab/ibleatools#88 · 2 assignees ·
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int-brain-lab/ibleatools#87 · 1 comment · 1 assignee ·
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int-brain-lab/ibleatools#86 · 1 assignee ·
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Difficulty 4/5 3-5 days Newbie friendliness 35/100
int-brain-lab/ibllib#1124 ·
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int-brain-lab/ibl-ai-agent#24 · 1 comment · 1 assignee ·
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Difficulty 5/5 Over a week Newbie friendliness 35/100
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int-brain-lab/ibllib#1122 · 1 assignee ·
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Provenance json Open
int-brain-lab/ibl-ai-agent#20 · 1 assignee ·
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int-brain-lab/mpci#5 · 1 assignee ·
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