Owner

havakv

4 indexed repositories · View on GitHub

pycox
Survival analysis with PyTorch

Python · 995 stars
torchtuples
Training neural networks in PyTorch

Python · 28 stars
deep_learning_reading_group

6 stars
safescope
Prevent access to global variables in functions

Python · 4 stars

Open All

Is there really an added value to couple the pycox to torchtuples? Open

enhancement

havakv/pycox#25 · 13 comments · 3 reactions · 0 assignees · Indexed Sep 17, 2026
Hyperparameter tuning in DeepSurv method Open

enhancement good first issue

havakv/pycox#26 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
cox_ph_loss_sorted Open

enhancement good first issue question

havakv/pycox#27 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Discretization error Open

question

havakv/pycox#44 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Predict log partial hazard Open

enhancement good first issue

havakv/pycox#45 · 7 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
AssertionError during c-index computation Open

enhancement good first issue

havakv/pycox#46 · 4 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Make example notebook on how to use torch optimizers/schedulers, early stopping callbacks etc Open

enhancement

havakv/pycox#50 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Example of how to use time-dependent covariates Open

havakv/pycox#56 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
predict survival function Open

havakv/pycox#57 · 4 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Thoughts about integration with pytorch-lightning? Open

havakv/pycox#60 · 12 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Evaluation metric Open

havakv/pycox#63 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Survival time predictions (with CoxPH) using medical images Open

enhancement

havakv/pycox#64 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Combining LogisticHazard models Open

havakv/pycox#76 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Dynamic-Deephit Open

havakv/pycox#77 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
How to provide the rank_mat for training deepHit model using the fit_dataloader()? Open

havakv/pycox#79 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Incoporate Time-Varying Data in "CoxCCDataset" function Open

havakv/pycox#87 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Time to event prediction using Graph Neural Networks Open

havakv/pycox#92 · 19 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Is there any method or way to get hazard ratio? Open

havakv/pycox#96 · 6 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
How predict just duration (continues value) of test dataset? Open

havakv/pycox#97 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Definitions/ explanations of the data features Open

havakv/pycox#99 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Event weighting for imbalanced datasets Open

havakv/pycox#100 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
How to deal with data about clicks Open

havakv/pycox#101 · 4 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Pycox importance variables Open

havakv/pycox#104 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
How can I save and load torchtuple model ? Open

havakv/pycox#105 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
error in Logistic Hazard Label transform Open

havakv/pycox#108 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
How to feed the model multiple inputs? Open

havakv/pycox#109 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
time varying with Deep Learning Open

havakv/pycox#110 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Is it possible to get 1) 95% confidence interval of time-dependent C-index and 2) calibration plot in Pycox package? Open

havakv/pycox#114 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Could you please tell me the pros and cons of your time-dependent C-index, compared to td AUC? Open

havakv/pycox#115 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Training using PyTorch training loop Open

havakv/pycox#117 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
trouble in reading flchain data Open

havakv/pycox#118 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
no loss for training with small batch size, Open

havakv/pycox#124 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Experience in train/val/test partitions with survival data in real-world datasets Open

havakv/pycox#125 · 7 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Applying SHAP to pycox models Open

enhancement

havakv/pycox#126 · 8 comments · 4 reactions · 0 assignees · Indexed Sep 17, 2026
Is it possible to apply saliency map or grad-cam with pycox? Open

havakv/pycox#128 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Could not use GPU for pycox Open

havakv/pycox#130 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Use Unet as a net for feeding it to logistichazard Open

havakv/pycox#131 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
#3: Deep Convolutional and LSTM Recurrent Neural Networks for Multimodal Wearable Activity Recognition Open

comment

havakv/deep_learning_reading_group#1 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
#7: Deep Kalman Filters Open

comment

havakv/deep_learning_reading_group#2 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Stacked Approximated Regression Machine: A Simple Deep Learning Approach Open

potential_paper

havakv/deep_learning_reading_group#3 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Adversarial Autoencoders Open

potential_paper

havakv/deep_learning_reading_group#4 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Use setattr instead of __dict__ Open

enhancement

havakv/safescope#2 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Proposed design change Open

enhancement

havakv/safescope#3 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Add unused variable warning Open

enhancement

havakv/safescope#4 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Use AdamW from pytorch Open

enhancement

havakv/torchtuples#6 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Use torch DataLoader if torchtupeles DataLoaderSlice is not supported Open

bug

havakv/torchtuples#8 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Remove callbacks that are no longer correct Open

bug

havakv/torchtuples#16 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Make it simpler to access train/val metrics Open

enhancement

havakv/torchtuples#17 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Stop wrapping optimizers to simplify use fo torch optimizers Open

enhancement

havakv/torchtuples#18 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 17, 2026
Can I use lr_scheduler of Pytorch in model.fit ? Open

havakv/torchtuples#24 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 17, 2026

havakv

Get new issues in your inbox