When creating a PR via agent merge, open PR, etc it does not honor repo skills

### Feature summary

Allow control over the open PR process

### What problem are you trying to solve?

My team has repo level skills for opening PRs which run various checks, the app bypasses that and none of our internal checks run

### Proposed solution

_No response_

### Workflow impact

_No response_

### Installation context

_No response_

### Additional context

_No response_