darwin-eu/IncidencePrevalence

Estimating incidence and prevalence with the OMOP CDM

Stars: 15
Forks: 8
Open beginner issues: 0
Indexed issues: 17

Dominant language: R
License: No license data
Last GitHub push: Jul 23, 2025
Latest indexed: Sep 15, 2026
Contributing guide: Contributing guide
Code of conduct: No code of conduct
Beginner labels: No beginner labels indexed
PR merge metrics: No merged PRs in 30d

Open All

17 open issues indexed

addDaysQuery produces erroneous query for Redshift driver Open

darwin-eu/IncidencePrevalence#7 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Overlap of multiple observation periods - Error in `validateGeneratedCohortSet()` Open

darwin-eu/IncidencePrevalence#9 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Timestamps and estimateIncidence Open

darwin-eu/IncidencePrevalence#12 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Suggestion to Add Cumulative Incidence Row (Incidence Proportion) Open

darwin-eu/IncidencePrevalence#15 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Clarification for requirementsAtEntry description in generateTargetDenominatorCohortSet() function Open

darwin-eu/IncidencePrevalence#16 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
.options/style argument for tableIncidenceAttrition() and tablePrevalenceAttrition() Open

darwin-eu/IncidencePrevalence#17 · 0 comments · 1 reaction · 0 assignees · Indexed Sep 15, 2026
Typo in IncidencePrevalence benchmarking Open

darwin-eu/IncidencePrevalence#18 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Adding additional methods to calculate confidence intervals Open

darwin-eu/IncidencePrevalence#19 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Does not take into account events outside of observation Open

darwin-eu/IncidencePrevalence#20 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
extra records in attrition Open

darwin-eu/IncidencePrevalence#21 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Why estimatePointPrevalence() does not have an option for selecting timepoint Open

darwin-eu/IncidencePrevalence#22 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
The order of age groups is not preserved Open

darwin-eu/IncidencePrevalence#23 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add option to export the results to Excel file Open

darwin-eu/IncidencePrevalence#24 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add option to calculate Incidence Proportion (cumulative incidence) Open

darwin-eu/IncidencePrevalence#25 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Type mismatch in generateDenominatorCohortSet() function Open

darwin-eu/IncidencePrevalence#27 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
To display the prevalence as percentage in tablePrevalence Open

darwin-eu/IncidencePrevalence#28 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Potential loss of follow-up when individuals transition between age bands in generateTargetDenominatorCohortSet() Open

darwin-eu/IncidencePrevalence#29 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026

A short digest of beginner-friendly GitHub issues.