common-workflow-language/cwlviewer

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A web application to view and share Common Workflow Language workflows

Stars: 52
Forks: 29
Open beginner issues: 0
Indexed issues: 57
Avg merge: 5h 12m
Merged PRs (30d): 6

Dominant language: Java
License: Apache-2.0
Last GitHub push: Sep 14, 2026
Latest indexed: Sep 15, 2026
Contributing guide: Contributing guide
Code of conduct: No code of conduct
Beginner labels: help wanted

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57 open issues indexed

Drilldowns into workflows/command line tools run by steps Open

enhancement

common-workflow-language/cwlviewer#39 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
retrievedFrom/By/On for whole workflow bundle is not semantically correct Open

bug

common-workflow-language/cwlviewer#74 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add selection to the fullscreen graph Open

enhancement help wanted

common-workflow-language/cwlviewer#82 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add generic interface for retrieving workflows Open

enhancement

common-workflow-language/cwlviewer#100 · 3 comments · 1 reaction · 0 assignees · Indexed Sep 15, 2026
layout: stack workflow outputs from same step w/ no other source Open

common-workflow-language/cwlviewer#105 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Improve handling of versioning for workflows Open

enhancement

common-workflow-language/cwlviewer#117 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Use shallow checkout for Git Open

help wanted

common-workflow-language/cwlviewer#127 · 0 comments · 1 reaction · 0 assignees · Indexed Sep 15, 2026
Research Object Spidering Open

common-workflow-language/cwlviewer#128 · 0 comments · 1 reaction · 0 assignees · Indexed Sep 15, 2026
Smarter Pagination Open

common-workflow-language/cwlviewer#137 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Submodule Issues Open

help wanted

common-workflow-language/cwlviewer#152 · 1 comment · 2 reactions · 0 assignees · Indexed Sep 15, 2026
Support for short commit ID forms Open

help wanted

common-workflow-language/cwlviewer#156 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Suggest 'related' workflows Open

help wanted

common-workflow-language/cwlviewer#163 · 0 comments · 1 reaction · 0 assignees · Indexed Sep 15, 2026
Separate Git branch references from the Workflow concept Open

common-workflow-language/cwlviewer#164 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
schemasalad:null being detected as items in an array Open

help wanted

common-workflow-language/cwlviewer#171 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
error messages should state version of cwltool being used Open

help wanted

common-workflow-language/cwlviewer#172 · 15 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Trying to open a subworkflow sometimes fails. Open

common-workflow-language/cwlviewer#179 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Expose schema.org annotations as text Open

help wanted

common-workflow-language/cwlviewer#180 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Don't label edge from Workflow InputParameter to WorkflowSteps Open

help wanted

common-workflow-language/cwlviewer#181 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Add option to embed 2D barcode in PNG exports Open

help wanted

common-workflow-language/cwlviewer#182 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
CWL CommandLineTools are not currently visualized Open

enhancement help wanted

common-workflow-language/cwlviewer#184 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Single request best effort diagram generation Open

common-workflow-language/cwlviewer#185 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
expand sub workflows in place Open

common-workflow-language/cwlviewer#201 · 4 comments · 2 reactions · 0 assignees · Indexed Sep 15, 2026
Support for local cwl workflow Open

common-workflow-language/cwlviewer#202 · 1 comment · 3 reactions · 0 assignees · Indexed Sep 15, 2026
simple command line tool for local execution Open

common-workflow-language/cwlviewer#203 · 1 comment · 4 reactions · 0 assignees · Indexed Sep 15, 2026
Further "productionize" view.commonwl.org Open

common-workflow-language/cwlviewer#208 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Accept a packed workflow (single file) via a HTTP(S) URL Open

help wanted

common-workflow-language/cwlviewer#210 · 4 comments · 1 reaction · 0 assignees · Indexed Sep 15, 2026
Possible issue with CWL workflow with ".json" ending? Open

help wanted

common-workflow-language/cwlviewer#211 · 14 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Search should also include the baseCommand(s) Open

help wanted

common-workflow-language/cwlviewer#214 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Publish in the EOSC Catalogue Open

common-workflow-language/cwlviewer#217 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Embeddable CWL workflow rendering Open

enhancement

common-workflow-language/cwlviewer#219 · 0 comments · 2 reactions · 0 assignees · Indexed Sep 15, 2026
How can I access private github repo ? Open

common-workflow-language/cwlviewer#221 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
API for post returning 200 Open

common-workflow-language/cwlviewer#222 · 2 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Archive the RO with diagram at Zenodo to get a DOI Open

common-workflow-language/cwlviewer#224 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Support CWL v1.2 ; visualize conditional steps Open

help wanted

common-workflow-language/cwlviewer#273 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Document & automate deployment process Open

common-workflow-language/cwlviewer#304 · 1 comment · 1 reaction · 1 assignee · Indexed Sep 15, 2026
Defer Research Object Bundle creation ; or drop altogether? Open

help wanted

common-workflow-language/cwlviewer#305 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
document how to connect Java debugger with docker compose Open

common-workflow-language/cwlviewer#319 · 5 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
document running mvn test + docker compose Open

common-workflow-language/cwlviewer#322 · 19 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
After cwltool error, re-submitting gets duplicate key error Open

common-workflow-language/cwlviewer#333 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
$graph document failed to parse and gives misleading error Open

common-workflow-language/cwlviewer#348 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Upgrade from Bootstrap 3 to Bootstrap 5 Open

common-workflow-language/cwlviewer#351 · 0 comments · 1 reaction · 0 assignees · Indexed Sep 15, 2026
error message is missing the cwltool version Open

common-workflow-language/cwlviewer#363 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Parsing some workflows → no inputs, outputs, nor steps; no graph. But no error‽ Open

common-workflow-language/cwlviewer#368 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Split database entities and response serialized objects (DTO) Open

common-workflow-language/cwlviewer#379 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
lots of 5xx server errors since March 6th Open

common-workflow-language/cwlviewer#394 · 4 comments · 1 reaction · 1 assignee · Indexed Sep 15, 2026
Display a better page for users when we fail to parse the workflow Open

common-workflow-language/cwlviewer#397 · 0 comments · 1 reaction · 1 assignee · Indexed Sep 15, 2026
Exception when creating a new workflow Open

common-workflow-language/cwlviewer#427 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
support self-hosted gitlab URLs instead of having to fill out the long form Open

common-workflow-language/cwlviewer#448 · 3 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
snakeyaml errors are not being reported to users Open

common-workflow-language/cwlviewer#457 · 7 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
report Git commit from this repo on the deployed About page or the footer Open

common-workflow-language/cwlviewer#462 · 1 comment · 1 reaction · 0 assignees · Indexed Sep 15, 2026

common-workflow-language/cwlviewer

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