carpentries-incubator

carpentries-incubator/workflows-nextflow

Workflow management with Nextflow and nf-core

Stars: 33
Forks: 43
Open beginner issues: 0
Indexed issues: 26

Dominant language: Nextflow
License: No license data
Last GitHub push: Sep 27, 2024
Latest indexed: Sep 15, 2026
Contributing guide: Contributing guide
Code of conduct: Code of conduct
Beginner labels: No beginner labels indexed
PR merge metrics: No merged PRs in 30d

Open All

26 open issues indexed

JOSE Submission Requirements Open

carpentries-incubator/workflows-nextflow#100 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Reordering description of the 'First Script' description Open

carpentries-incubator/workflows-nextflow#104 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep1 Open

bug

carpentries-incubator/workflows-nextflow#113 · 1 comment · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep2 sleep parameters Open

carpentries-incubator/workflows-nextflow#114 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep3 reminder, lists and maps Open

carpentries-incubator/workflows-nextflow#117 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep3, tuple definition Open

carpentries-incubator/workflows-nextflow#119 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep4 python/Rscript script Open

carpentries-incubator/workflows-nextflow#123 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep4 python/Rscript materials Open

carpentries-incubator/workflows-nextflow#124 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep4 shell directive Open

carpentries-incubator/workflows-nextflow#125 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep4 ${...} Open

carpentries-incubator/workflows-nextflow#126 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep5 , work directory Open

carpentries-incubator/workflows-nextflow#127 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep5 , CPUs, cores and threads Open

carpentries-incubator/workflows-nextflow#128 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep6 MULTIQC error Open

carpentries-incubator/workflows-nextflow#130 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep7 , regex Open

carpentries-incubator/workflows-nextflow#131 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep7, complex operator examples Open

carpentries-incubator/workflows-nextflow#132 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep8, hash reporting Open

carpentries-incubator/workflows-nextflow#133 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep8, finale exercise Open

carpentries-incubator/workflows-nextflow#134 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep9, fastp conda error, libmamba Open

carpentries-incubator/workflows-nextflow#135 · 0 comments · 0 reactions · 1 assignee · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep11, recap Open

carpentries-incubator/workflows-nextflow#139 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep11, FASTQC Open

carpentries-incubator/workflows-nextflow#140 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep11, error script 6 Open

carpentries-incubator/workflows-nextflow#141 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep11, Ternary operators Open

carpentries-incubator/workflows-nextflow#142 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep11, Key points Open

carpentries-incubator/workflows-nextflow#148 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Nextflow review @bobturneruk ep11, new content Open

carpentries-incubator/workflows-nextflow#149 · 1 comment · 0 reactions · 0 assignees · Indexed Sep 15, 2026
Command error: ln: failed to create symbolic link : Operation not supported Open

carpentries-incubator/workflows-nextflow#153 · 4 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026
@Nextflow review @HadrienG user-specified file names Open

carpentries-incubator/workflows-nextflow#165 · 0 comments · 0 reactions · 0 assignees · Indexed Sep 15, 2026

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