angelolab / angelolab/Nimbus-Inference

Magnification parameter

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#61 1 comentario 0 reacciones 0 asignados Ver en GitHub
enhancement
Lenguaje dominante
Python
Estrellas
45
Forks
9
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Sin PR fusionados en 30 d

Descripción

### Description of feature

Hey @JLrumberger ,

I just wanted to ask why the `--magnification` parameter in the `MultiplexDataset` is hardcoded to 20 and is not showing up in the tutorial? Shouldn't that be a highly important parameter to set depending on which microscope/platform the image was acquired on (e.g. CODEX has a much higher resolution thatn IMC etc.). If the dataset has a MPP of 1, does it make sense to set magnification to 10? Did I trace that correctly?

Thanks!

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