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YeoLab

4 indexed repositories · View on GitHub

rbp-maps
splicing and feature maps for RBPs

Python · 25 stars
skipper
Skip the peaks and expose RNA-binding in CLIP data

Python · 10 stars
repetitive-element-mapping
pipeline for mapping repetitive elements

Python · 7 stars
containers
Collection of Dockerfiles

Dockerfile · 0 stars

Beginner friendly Everything

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Error when running skipper in paired end mode Open

Difficulty 2/5 1-3 hours Newbie friendliness 55/100

YeoLab/skipper#57 · 1 comment · Opened Feb 6, 2026
skipper applicability Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

YeoLab/skipper#53 · 3 comments · Opened Nov 27, 2025
missing value where TRUE/FALSE needed in finemap_enriched_windows.R Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

YeoLab/skipper#12 · Opened Jul 3, 2023
Having issues with one of the RUN in the docker file Open

YeoLab/containers#7 · 5 comments · 1 assignee · Opened Jun 7, 2023
(partition_bam_reads) Error: line number 29869383 of file - has 3 fields, but 6 were expected. Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

YeoLab/skipper#5 · 3 comments · Opened Feb 4, 2023
MXEPlotter is missing the renumber_axes function Open

Difficulty 3/5 1-2 days Newbie friendliness 30/100

YeoLab/rbp-maps#13 · Opened Apr 21, 2022
UnboundLocalError: local variable 'interval' referenced before assignment Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

YeoLab/rbp-maps#11 · 1 comment · Opened Mar 28, 2022
CondaValueError: invalid package specification: name: rbp-maps Open

Difficulty 2/5 1-3 hours Newbie friendliness 35/100

YeoLab/rbp-maps#10 · Opened Mar 28, 2022
"AttributeError: Peak instance has no attribute 'peaks' " when plot peak overlaps instead of read density Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

YeoLab/rbp-maps#9 · Opened Nov 1, 2021
/usr/bin/env: eCLIP_repelement_SE_singleNode: No such file or directory Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

YeoLab/repetitive-element-mapping#2 · 2 comments · Opened May 14, 2021

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