WormBase / WormBase/ACKnowledge
Extract genes from all C. elegans papers with TFIDF=10 and save the results to pap_gene
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ntt_extraction_pipelines
- Dominant language
- JavaScript
- Stars
- 3
- Forks
- 1
- PR merge metrics
- No merged PRs in 30d
Description
- process papers after 2009
- Use a different evidence
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue does not name any files, tests, or entry points. Start by locating the paper-processing workflow and the pap_gene data store, then determine how papers after 2009 and TFIDF=10 are currently represented. Done should include an agreed evidence method and saved gene results for all matching C. elegans papers.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics, data
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100