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Project-MONAI

8 indexed repositories · View on GitHub

MONAI
AI Toolkit for Healthcare Imaging

Python · 8692 stars
tutorials
MONAI Tutorials

Jupyter Notebook · 2548 stars
MONAILabel
MONAI Label is an intelligent open source image labeling and learning tool.

Python · 891 stars
model-zoo
MONAI Model Zoo that hosts models in the MONAI Bundle format.

Python · 338 stars
monai-deploy-app-sdk
MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imagi...

Python · 138 stars
MetricsReloaded

Python · 104 stars
project-monai.github.io
project monai website https://project-monai.github.io/

Astro · 9 stars
wg-ultrasound

Jupyter Notebook · 7 stars

Beginner friendly Everything

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MONAI bundle SwinUNETR failing with TypeError Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

Project-MONAI/MONAILabel#1894 · Opened Feb 26, 2026
padding has incorrect dimension for `nn.AvgPool2d`'s `def __init__()` Open

Project-MONAI/model-zoo#776 · 1 comment · 1 assignee · Opened Feb 17, 2026
`apex.contrib.clip_grad.clip_grad_norm_` crashes with PyTorch 2.10 Open

Difficulty 4/5 3-5 days Newbie friendliness 42/100

Project-MONAI/MONAI#8737 · Opened Feb 11, 2026
Add introductory k-space basics tutorial for MRI reconstruction Open

Difficulty 3/5 1-2 days Newbie friendliness 68/100

Project-MONAI/tutorials#2055 · Opened Feb 9, 2026
[HAI] Label Reviewer data loader fails for multiple label sets or subsequent review sessions Open

Human-AI Interaction

Project-MONAI/MONAILabel#1891 · 1 reaction · 1 assignee · Opened Feb 7, 2026
Feature Request: Evaluation of Semantic Segmentation Metrics on a per-component basis Open

Difficulty 5/5 Over a week Newbie friendliness 42/100

Project-MONAI/MONAI#8733 · 2 comments · Opened Feb 6, 2026
Feature Request: Add SparseDice, SparseClDice, CenterlineDice Losses and 3D TransUNet Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

Project-MONAI/MONAI#8731 · 1 comment · Opened Feb 4, 2026
Bug Report: MONAI Import Hangs on macOS with Apple Silicon (MPS) Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

Project-MONAI/MONAI#8721 · 1 comment · Opened Jan 26, 2026
[BUG] MAR cannot find libcuda.so Open

bug

Project-MONAI/monai-deploy-app-sdk#576 · 3 comments · 4 assignees · Opened Jan 23, 2026
discrepancy between local pre-commit and CI's codeformat Open

CI/CD

Difficulty 3/5 1-2 days Newbie friendliness 55/100

Project-MONAI/MONAI#8683 · 5 comments · Opened Jan 5, 2026
Fix all the build issues, test and verify all basic features and release a new version for monailabel Open

Project-MONAI/MONAILabel#1882 · 2 comments · 2 reactions · 1 assignee · Opened Dec 24, 2025
Blurry Results After Training and Poor Performance After Fine-Tuning on BTCV Dataset Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

Project-MONAI/tutorials#2052 · 2 comments · Opened Dec 24, 2025
Ignore Class Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

Project-MONAI/MONAI#8667 · 1 comment · 2 reactions · Opened Dec 21, 2025
NRRD Reader for 4D images Open

Difficulty 3/5 1-2 days Newbie friendliness 58/100

Project-MONAI/MONAI#8653 · 1 comment · Opened Dec 3, 2025
Add Fréchet Radiomics Distance (FRD-Score) to MONAI Metrics Open

Feature request Feedback welcomed

Project-MONAI/MONAI#8643 · 4 comments · 1 assignee · Opened Nov 25, 2025
The issue of deserialization with pickle in MONAI Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

Project-MONAI/MONAI#8635 · 1 comment · Opened Nov 17, 2025
[Feature Request] MONAI + FastAPI Inference Deployment Tutorial Open

Project-MONAI/tutorials#2048 · 1 assignee · Opened Nov 16, 2025
Torchscript Deprecation Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

Project-MONAI/MONAI#8632 · Opened Nov 14, 2025
MAISI missing labels for conditioning maisi-rflow with vista3D pseudo labels Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

Project-MONAI/tutorials#2047 · 1 comment · Opened Nov 12, 2025
monai.io down Open

Difficulty 2/5 1-3 hours Newbie friendliness 35/100

Project-MONAI/project-monai.github.io#93 · Opened Nov 10, 2025
Add hugging face dependencies in new metadata Open

Difficulty 1/5 Under an hour Newbie friendliness 35/100

Project-MONAI/model-zoo#772 · 1 comment · Opened Nov 5, 2025
Please use MONAI Discussion tab for questions Open

Difficulty 1/5 Under an hour Newbie friendliness 25/100

Project-MONAI/MONAI#8608 · 3 reactions · Opened Oct 31, 2025
Add metadata when using API to retrieve bundles Open

Difficulty 3/5 1-2 days Newbie friendliness 45/100

Project-MONAI/model-zoo#770 · 2 comments · Opened Oct 30, 2025
Establish clear communication processes on upcoming architectural changes/functionality updates (deprecation, etc). Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

Project-MONAI/MONAILabel#1873 · Opened Oct 29, 2025
Clarify the process how we want to work/prioritize with the issues Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

Project-MONAI/MONAILabel#1872 · Opened Oct 29, 2025
[HAI] Prevention of inconsistent label specifications Open

Human-AI Interaction

Difficulty 4/5 3-5 days Newbie friendliness 35/100

Project-MONAI/MONAILabel#1871 · 1 comment · Opened Oct 29, 2025
Zoo page cannot be reached Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

Project-MONAI/model-zoo#769 · 3 comments · Opened Oct 29, 2025
Consistent label specification in App interface Open

Human-AI Interaction

Difficulty 5/5 Over a week Newbie friendliness 25/100

Project-MONAI/MONAILabel#1870 · Opened Oct 29, 2025
Clarify and standardize the model type and interaction scheme taxonomy Open

Human-AI Interaction

Difficulty 5/5 Over a week Newbie friendliness 25/100

Project-MONAI/MONAILabel#1869 · Opened Oct 29, 2025
Provide a well defined terminlogy to encode label meaning semantically Open

Human-AI Interaction

Difficulty 5/5 Over a week Newbie friendliness 35/100

Project-MONAI/MONAILabel#1868 · 23 comments · Opened Oct 29, 2025
Revisit/Evolve the MONAI Label API based on the consensus Open

Human-AI Interaction

Difficulty 5/5 Over a week Newbie friendliness 20/100

Project-MONAI/MONAILabel#1867 · Opened Oct 29, 2025
AttributeError in DataLoader when using RandGridDistortiond transform Open

Difficulty 2/5 1-3 hours Newbie friendliness 58/100

Project-MONAI/MONAI#8604 · 3 comments · Opened Oct 27, 2025
Add sigmoid/softmax interface for `AsymmetricUnifiedFocalLoss` Open

Difficulty 4/5 3-5 days Newbie friendliness 48/100

Project-MONAI/MONAI#8603 · 1 comment · Opened Oct 26, 2025
cannot visit the web site! Open

Difficulty 3/5 1-2 days Newbie friendliness 20/100

Project-MONAI/MONAILabel#1865 · 1 comment · Opened Oct 23, 2025
Maisi-v2 code related to the Contrastive loss Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

Project-MONAI/tutorials#2043 · 1 comment · Opened Oct 23, 2025
Make MONAI generative features compatible with huggingface diffusers library Open

GenerativeModels

Difficulty 4/5 3-5 days Newbie friendliness 38/100

Project-MONAI/MONAI#8597 · Opened Oct 17, 2025
Tutorial Proposal: Visual Medical Imaging Workflows with ComfyUI Integration for Clinical Lesion Detection and Segmentation Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

Project-MONAI/tutorials#2039 · Opened Oct 6, 2025
Spleen CT Segmentation bundle need to stop using the flipped images (in LPS but passed as in RAS) from Medical Decathlon as input Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

Project-MONAI/model-zoo#766 · Opened Oct 4, 2025
[MAISI] Pretrained weights did not generate MRI volume unconditionally Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

Project-MONAI/tutorials#2028 · 1 comment · Opened Sep 6, 2025
Increasing the relevance of MONAI to CAI (computer assisted intervention). Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

Project-MONAI/MONAI#8557 · 3 comments · 1 reaction · Opened Sep 5, 2025
Modify calls to generative models diffusion model inferers to account for new inferer class Open

Project-MONAI/model-zoo#765 · 1 assignee · Opened Sep 5, 2025
Modify calls to generative models diffusion model inferers to account for new inferer class Open

Project-MONAI/tutorials#2027 · 1 assignee · Opened Sep 5, 2025
Create "Inferer" class for Diffusion Models specifically Open

GenerativeModels

Project-MONAI/MONAI#8556 · 1 assignee · Opened Sep 5, 2025
Issues with multiple labels and masks overlapping in Monailabel Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

Project-MONAI/MONAILabel#1856 · 3 comments · Opened Sep 2, 2025
MONAI Auto3DSeg: Manual Fold Assignment Results in Zero Samples Error Open

Project-MONAI/tutorials#2024 · 2 comments · 2 assignees · Opened Aug 30, 2025
Default for SupervisedTrainer slows down training almost 2x Open

Difficulty 3/5 1-2 days Newbie friendliness 48/100

Project-MONAI/MONAI#8541 · Opened Aug 19, 2025
maisi unconditioned inference return noise Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

Project-MONAI/tutorials#2017 · 3 comments · Opened Aug 11, 2025
Integrating MICCAI Submissions into MONAI Open

Difficulty 5/5 Over a week Newbie friendliness 15/100

Project-MONAI/MONAI#8519 · 61 comments · 5 reactions · Opened Jul 24, 2025
Data preparation for MAISI tutorial is wrong for non-RAS data Open

Difficulty 3/5 1-2 days Newbie friendliness 55/100

Project-MONAI/tutorials#2012 · 1 comment · Opened Jul 23, 2025
Training time of MAISI VAE Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

Project-MONAI/tutorials#2009 · 1 comment · Opened Jul 18, 2025

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