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Medical-Event-Data-Standard

11 indexed repositories · View on GitHub

• meds

  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data

  Python · 134 stars

• meds_etl

  A collection of ETLs from common data formats to Medical Event Data Standard

  Python · 43 stars

• MEDS-DEV

  The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health

  Python · 43 stars

• MIMIC_IV_MEDS

  The MIMIC-IV MEDS ETL

  Python · 25 stars

• ETL_MEDS_Template

  A template repository for a MEDS-Transforms powered extraction pipeline for a custom dataset.

  Python · 7 stars

• eICU_MEDS

  An eICU Extraction template for MEDS

  Python · 7 stars

• MEDS_ML4H_2025_Tutorial

  Files and resources for the MEDS ML4H 2025 Tutorial

  Jupyter Notebook · 5 stars

• meds_testing_helpers

  Testing, benchmarking, and synthetic data generation helpers for MEDS tools, pipelines, and models.

  Python · 4 stars

• medical-event-data-standard.github.io

  GitHub Pages site for MEDS

  Jupyter Notebook · 4 stars

• flexible_schema

  A simple metaclass mixin to enable specifying validatable schemas with optional columns or while allowing column re-ordering or extra col...

  Python · 1 star

• meds_summary_stats

  Fast, privacy-safe summary statistics over MEDS datasets, for validating and regression-testing MEDS ETLs.

  Python · 1 star