Owner

LewisLabUCSD

9 indexed repositories · View on GitHub

• Ligand-Receptor-Pairs

  Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.

  155 stars

• MammalianSecretoryRecon

  Secretory Pathway Reconstruction for Human, CHO, and Mouse

  Jupyter Notebook · 12 stars

• PinAPL-Py

  A no hassle tool for analyzing your favorite CRISPR screen dataset!

  Python · 11 stars

• GlyCompare

  Comparing glycoprofiles, leveraging motif substructure arithmetic

  Jupyter Notebook · 10 stars

• StanDep

  Code for StanDep Paper

  MATLAB · 5 stars

• RegressionModelPipeline

  Pipeline for feature selection, interaction assessment, regression modeling and prediction assessment for 1-1000s of features

  R · 4 stars

• GlyCompareCT

  glyCompare command line tool

  Python · 3 stars

• iGSEA

  Wrap code for runing GSEA analysis

  R · 2 stars

• Mito_Trace

  Tracking cell-lineage using mutations in the mitochondrion genome.

  Jupyter Notebook · 0 stars