INCATools/boomer

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Bayesian OWL ontology merging

Stars: 37
Forks: 2
Open beginner issues: 0
Indexed issues: 27

Dominant language: Scala
License: BSD-3-Clause
Last GitHub push: Jun 4, 2025
Latest indexed: Sep 17, 2026
Contributing guide: No contributing guide
Code of conduct: No code of conduct
Beginner labels: good first issue
PR merge metrics: No merged PRs in 30d

Beginner friendly Everything

Open All

27 open issues indexed

output subsequent scores for singleton mappings Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

INCATools/boomer#459 · 1 comment · Opened May 30, 2025
Merging 14 Ontologies (huge merge) Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

INCATools/boomer#403 · 6 comments · Opened Feb 5, 2024
"No possible resolution of perplexity" + no results Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

INCATools/boomer#399 · 11 comments · Opened Jan 12, 2024
fail fast if there are no satisfiable solutions Open

Difficulty 4/5 3-5 days Newbie friendliness 20/100

INCATools/boomer#369 · Opened Jul 11, 2023
Add additional diagnostics to figure out points where boomer doesn't complete Open

Difficulty 5/5 Over a week Newbie friendliness 38/100

INCATools/boomer#361 · 1 comment · Opened Jun 12, 2023
Docs: Add link to `README.md` Open

good first issue

Difficulty 1/5 Under an hour Newbie friendliness 45/100

INCATools/boomer#354 · Opened Apr 28, 2023
Report posterior probability of each proposed axiom in a solution Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

INCATools/boomer#335 · Opened Feb 3, 2023
Supporting the Mapping Integration workflow Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

INCATools/boomer#334 · 1 comment · Opened Jan 31, 2023
Supporting Mapping QC workflow Open

Difficulty 5/5 Over a week Newbie friendliness 30/100

INCATools/boomer#333 · Opened Jan 31, 2023
JSON filenames that are hashed have no mention in the `output.md` file Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

INCATools/boomer#323 · 1 comment · Opened Dec 16, 2022
What do the images mean? Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

INCATools/boomer#322 · 2 comments · Opened Dec 16, 2022
Output sssom mapping files rather than (just) owl Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

INCATools/boomer#293 · 1 comment · Opened Jun 29, 2022
Boomer: How to deal with huge cliques? Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

INCATools/boomer#292 · 3 comments · Opened May 25, 2022
allow providing prefixes declarations separate from list of prohibited within-namespace equivalents Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

INCATools/boomer#289 · 1 comment · Opened May 17, 2022
What is the best way to communicate changes in axioms to a user Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

INCATools/boomer#279 · 2 comments · Opened Mar 21, 2022
Consider not outputting cliques of size 2 or less Open

Difficulty 2/5 1-3 hours Newbie friendliness 35/100

INCATools/boomer#278 · 1 comment · Opened Mar 21, 2022
Provided more detailed documentation of window-count Open

Difficulty 3/5 1-2 days Newbie friendliness 25/100

INCATools/boomer#277 · Opened Mar 21, 2022
Bayesian calculation of unspecified probabilities from priors Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

INCATools/boomer#269 · Opened Mar 16, 2022
Boomer markdown output Open

Difficulty 5/5 Over a week Newbie friendliness 20/100

INCATools/boomer#266 · 2 comments · Opened Mar 11, 2022
Make a static site for this project Open

Difficulty 4/5 3-5 days Newbie friendliness 45/100

INCATools/boomer#262 · Opened Mar 3, 2022
Add more documentation on how to explore output Open

INCATools/boomer#261 · 2 comments · 1 assignee · Opened Mar 3, 2022
Treat 1.0 probability as required axiom Open

Difficulty 4/5 3-5 days Newbie friendliness 35/100

INCATools/boomer#255 · Opened Feb 14, 2022
json output should include "sibling" relations, for depiction in graphics Open

Difficulty 3/5 1-2 days Newbie friendliness 35/100

INCATools/boomer#196 · 3 comments · Opened Jul 7, 2021
boomer selects suboptimal solution in simple 3-node problem Open

Difficulty 4/5 3-5 days Newbie friendliness 30/100

INCATools/boomer#158 · 6 comments · Opened Feb 5, 2021
Annotate axioms in output ontology with prior probabilities Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

INCATools/boomer#147 · 2 comments · Opened Feb 1, 2021
accept SSSOM format Open

Difficulty 4/5 3-5 days Newbie friendliness 25/100

INCATools/boomer#47 · 14 comments · Opened Apr 22, 2020
Using justification in posterior probability scoring Open

Difficulty 5/5 Over a week Newbie friendliness 25/100

INCATools/boomer#38 · 1 comment · Opened Apr 12, 2020

INCATools/boomer

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